Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g1012 ATGATGAATAAGAATAAGGATCATGATAAGAAGAACAAGAAGCCTCGACTTGCTTGGTCGGTGGAGTTGCACCGCAAGTTTGTTCATGTTGTTAATCTTTTAGGAATTGAGAATGTTGTACCTAGAAAAATTCTTGCGTTGATGAACGATGAAAGACTTAGAAAGGAGAATGTGGCCAGTCATCTTCAGAATGTTTCTCCAAGTGATACTGTTTATCAGAACGATGCTGTTCAAGAAATGCTGATTTCAACATGGCATTCCGACGAAAGCCTTGATTCGTTGTTCGATGATGTGTTTTTGCAATGGTGGGAAGACCATAATAAGGATGCAACTGACCTTTCAGATGTTATTGGTACCTCACCAAACACTCTGATTCCTTTGAAGGATGTTGTTAATAGTAATATTGGTTCAATACAAGACTTGGTTAGTGTTGCATTTCCCAGCTGCATCTCCCACGAGTCGATCAAGATCGGGGAGCTGAGACAAGAGATTGCTGCAACCAGAAATGAGACTCATCAATTGAGGGAGACGATTCAAGCGTTGAAGGGACAACAGGACATGTTGGTGCAAGTTGTTCTACAGGTTCTCCCACCCAATGTGTTAATGCAACAATAG 615 0.4114 MMNKNKDHDKKNKKPRLAWSVELHRKFVHVVNLLGIENVVPRKILALMNDERLRKENVASHLQNVSPSDTVYQNDAVQEMLISTWHSDESLDSLFDDVFLQWWEDHNKDATDLSDVIGTSPNTLIPLKDVVNSNIGSIQDLVSVAFPSCISHESIKIGELRQEIAATRNETHQLRETIQALKGQQDMLVQVVLQVLPPNVLMQQ 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g1012 204 Gene3D - 10 68 - -
Lal20g1012 204 Coils Coil 157 184 - -
Lal20g1012 204 PANTHER TWO-COMPONENT RESPONSE REGULATOR 4 63 - -
Lal20g1012 204 SUPERFAMILY Homeodomain-like 13 64 IPR009057 -
Lal20g1012 204 PANTHER TWO-COMPONENT RESPONSE REGULATOR 4 63 IPR045279 GO:0009736
Lal20g1012 204 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 14 64 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g1012 Lal-Chr20 13460024 13461838 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g1012 5 63 Response Regulator Gene Family AT3G16857 63.333 4.33e-17 77.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lal20g1012 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g1012 - K14491 lang:109344458 259.225