Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g1006 GGTGAGAGAGATTGGATAGCCACTATAGCTGAGCAGCTTACACTTCACATAATCAAATGGCACTATTTTCCAGGACATATATGTGTAGACAGCAAAAGCAAAGACACAAGGGCAGCAACAAAGGCAGCTGCAGAGAAAAATACAGATGCATCAGAGCCTTTCTCTGTCTCAAATATGATGAGTAGTTCAGGTGCAAGTGTTAGAAATAGGTCTCCTTTTACATCAACTCAATGGCAAGAACTTGAACAACAAGCACTTATTTTTAAGTACATGGTTACAGGAACTCCAATTCCACCTGATCTAATCTACTCTATTAAAAGAAGTTTAGATTCTTCAATAACTTCAAGACTCTTCCCACATCAACCTATTGGATGGGGATGTTTTGAAATGGGTTTTGGCAGAAAAGTAGACCCAGAGCCAGGAAGGTGCAGAAGAACAGATGGCAAGAAATGGAGATGTTCAAAGGAAGCATATCCAGACTCAAAGTACTGTGAGAGACACATGCACAGAGGCAGAAACCGTTCAAGAAAGCCTGTGGAAGTTTCTTCAACAACAAGCACAGCATCAACAACATCAACAACAACAACTTCAAACACACTTCAACCAATCCCATCTTACAATAGGAACAACAACCTTTCTATGAACAACATCAACAACATGATTTCTACTTCTTCTTTCCCTTTCTCTCCTTTACCCTCATCCATTAGTGCTTCTGAGTCCCAACCCTTTTCCCAATCTTACCAAACCTCTTCTCTTAATCCCTTCTTTTACTCTCAATCAACCTCTTCTAGACCCACTGATTCTGAATCTGATTTTCTATCACCAGATGCCACTACCCACCAGCTATTTATGGATTCTGGGTCTTTTTCTCATAATGACAAGGACTACAGGCATATTCATGGAATGAGAGAGGGTGTAGATGAGAGAGCTTTCTTCCCAGACGCTTCAGGATCTGCTAGAACATACCCAGAATCATATCAACAACTATCAATGAGTTCATATAAACCCTATTCAAACTCACACTTTCAAAACATGAATGAAAACACAAACAAGCAAGAGCAACATTGCTTTGTTTTAGGTACTGACTTCAAATCAGAGAGACTAAGCAAAGAGAAAGAAACTGAGACAACAACAACAAGCCAGAAACCCCTTCACCATTTCTTTGGAGAGTGGACACCAAAGAACACTGATTCCTGGCTTGATCTTGCTTCAAACTCTAGAATCCAAACCGATGAGTGA 1239 0.4019 GERDWIATIAEQLTLHIIKWHYFPGHICVDSKSKDTRAATKAAAEKNTDASEPFSVSNMMSSSGASVRNRSPFTSTQWQELEQQALIFKYMVTGTPIPPDLIYSIKRSLDSSITSRLFPHQPIGWGCFEMGFGRKVDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEVSSTTSTASTTSTTTTSNTLQPIPSYNRNNNLSMNNINNMISTSSFPFSPLPSSISASESQPFSQSYQTSSLNPFFYSQSTSSRPTDSESDFLSPDATTHQLFMDSGSFSHNDKDYRHIHGMREGVDERAFFPDASGSARTYPESYQQLSMSSYKPYSNSHFQNMNENTNKQEQHCFVLGTDFKSERLSKEKETETTTTSQKPLHHFFGEWTPKNTDSWLDLASNSRIQTDE 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g1006 412 MobiDBLite consensus disorder prediction 178 211 - -
Lal20g1006 412 ProSiteProfiles WRC domain profile. 137 181 IPR014977 -
Lal20g1006 412 ProSiteProfiles QLQ domain profile. 72 107 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lal20g1006 412 MobiDBLite consensus disorder prediction 367 397 - -
Lal20g1006 412 MobiDBLite consensus disorder prediction 164 211 - -
Lal20g1006 412 Pfam QLQ 72 105 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lal20g1006 412 Pfam WRC 138 180 IPR014977 -
Lal20g1006 412 SMART QLQ_2 71 107 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lal20g1006 412 PANTHER - 66 411 IPR031137 GO:0005634|GO:0006351|GO:0032502
Lal20g1006 412 PANTHER GROWTH-REGULATING FACTOR-LIKE PROTEIN 66 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g1006 Lal-Chr20 13367476 13369865 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g1006 59 390 GRF Transcription Factor Family AT3G13960 38.250 8.24e-73 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Lal20g1006 WRC 2.4e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g1006 - - vun:114166369 496.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g1006 20 13367476 13369865 Lal20g1006 20 13367476 13369865 ECH