Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0932 ATGCAATCCTCAGAGTTGGTCGAGAAAACTGAAACCGGTGAACATGATTCCACAGCTAACGAGAAACGCACCAAGTTCTACGATGTCTATGGACCCCAAGGCCAGGCAGAAGTTGTTTTCAACTCACCAGAAGATAATTCAACTCTGAATCTTAATGACGTCCAAGGACTTGTAACTTGGGTGCTTGGTGAAGGATTTATGCCATCATGGGTTTTTATCAAGAATAAACCTCTTATTCCCAAAGTGGTTATGCTCTATATGCCAGGCCTGGATGCAGCTTTGTTCTTGTCACAGTCTAAAATGCTTCCCAATTTTAAAAAGTTCTGTCGCAAGCCAAGGCCACTACTAGCTCTTAGCTGTGTATCAGATGGTATGCAGACAGTAGACGCACTTCTAACATGCAAGCTGAAAAGAAAGAGGGATCAAAATAGTTCAATTGTGACAAAATCTACTCTGATTTCTCAAGAAGAAGGCTGTAATGGTACAGAAAGTGTATCATTTGTGGAGCTTATGAAAGACATACCCTTTCCTGTTGCATACTATACACTAACAGAGAAAGAAATGGAAGAGAATGGATATTCTGTTAATCAGTCAGGTTTTCTTTCTACTGTGCCTGCTCCTCTGGGATCATCTTTTTACGAGATGTTAGCAGTTGATTGTGAGATGTGCATAACAAGTGAAGGTTTTGAACTGACCAGAGTTACTCTAGTGGATGTCGAAGGAAAGGTTTTGATAGATAAACTGGTTAAACCATCAAATGCTATTACTGATTACAATACCAGATTTAGTGGAATAACATCTGAGATGTTAGATGGGGTGACAACAAGTCTGAGAGACATTCAGGAAGAGTTTCTGAAGCTGGTTTACAAAGAGACTATCCTTGTTGGGCATTCCTTGGAAAATGATTTATTAGCATTGAAGATATCTCATGATTTGGTAATTGACACAGCTGTATTATATAAACACCCACGGGGATCATCTCATAAAAGTGCTCTACGGGTTCTTGCTAAGCGATTTCTTTCAAAGGAGATACAGCAATCAGGGAATGGACATGACAGCATTGAAGATGCTAGAACCACCATGGAATTGGCACTACTGAAGATCCGAAATGGCAAGAAAAAACTCCTTTCCATTTTGAACGAGTCTGGCAAGACCTCCTCCTTAATTGATGAGATATCCATAGTGAAACGATATGCCTCTGAGTCATCTCATTCAATTCCAGTGACCTCTGATGATGATGCACTTGCGAAAACCAGCAAGGAGGTGAAGAACGATAAGGTACATTTTATCTGGACTCAGTTCTCAGAGTTACACTCATACTTAAAGAAACAAGCTGAAGATTCAGAGGTCTTGAATAAAAGACTTGCAGAGATGATGGCATTACTTACATGCCAGAAGAATTCCACAAATGGTAAAGCCTTAAAGTTTAGTGCATCTGCCGAACTGAAGCAAATTCTTGCTCGAATGGATACTAGAGTTTATAAACTGTATACGTCATTGCCTACAAATGCTATGTTGATAATATGCACCGGCCATGGAGACACAGCAATTGTCCGCAGGTTAAGGAAAATGCTTGCTGAGCAGAGTGAAAGTAACTTATGTCGAGAACATATTATCGAAATCTTGGAGGAGGTTCAGGCTCGAGCTGAAGTTGCCTTATGTTTCGTGGGTGTTAAACATTGA 1683 0.4023 MQSSELVEKTETGEHDSTANEKRTKFYDVYGPQGQAEVVFNSPEDNSTLNLNDVQGLVTWVLGEGFMPSWVFIKNKPLIPKVVMLYMPGLDAALFLSQSKMLPNFKKFCRKPRPLLALSCVSDGMQTVDALLTCKLKRKRDQNSSIVTKSTLISQEEGCNGTESVSFVELMKDIPFPVAYYTLTEKEMEENGYSVNQSGFLSTVPAPLGSSFYEMLAVDCEMCITSEGFELTRVTLVDVEGKVLIDKLVKPSNAITDYNTRFSGITSEMLDGVTTSLRDIQEEFLKLVYKETILVGHSLENDLLALKISHDLVIDTAVLYKHPRGSSHKSALRVLAKRFLSKEIQQSGNGHDSIEDARTTMELALLKIRNGKKKLLSILNESGKTSSLIDEISIVKRYASESSHSIPVTSDDDALAKTSKEVKNDKVHFIWTQFSELHSYLKKQAEDSEVLNKRLAEMMALLTCQKNSTNGKALKFSASAELKQILARMDTRVYKLYTSLPTNAMLIICTGHGDTAIVRRLRKMLAEQSESNLCREHIIEILEEVQARAEVALCFVGVKH 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0932 560 MobiDBLite consensus disorder prediction 8 23 - -
Lal20g0932 560 MobiDBLite consensus disorder prediction 1 24 - -
Lal20g0932 560 Gene3D - 212 385 IPR036397 GO:0003676
Lal20g0932 560 SMART exoiiiendus 214 373 IPR013520 -
Lal20g0932 560 Pfam Exonuclease 217 363 IPR013520 -
Lal20g0932 560 SUPERFAMILY Ribonuclease H-like 215 375 IPR012337 -
Lal20g0932 560 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 12 545 - -
Lal20g0932 560 CDD REX1_like 216 365 IPR034922 -
Lal20g0932 560 PANTHER LD29573P 12 545 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0932 Lal-Chr20 12037200 12052022 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0932 208 363 C2H2 Transcription Factor Family AT2G48100 29.240 3.78e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0932 K14570 - gmx:100802793 913.294