Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0715 ATGAGAAGCTGGTTTATTCAAGTGAAGAGGCTCTTCATATGGGACACACCTTCCACATCAGAGAAGAAGGATAGAAGAAGGAAATGGATGACACTGCCTTCAATTAAAGCACCATCACCATCAAAAGAAACAAGAATATGTGAAGCTGAGGAAGAACACAGCAAGAAGGCTTTAACAGTGGCCATTGCTTCTGCTGCTGAAGCTGCTATAACTGCTGCTCATGTTGCTGTTGAGGTTGTTAGGCTTCATTCTGCTCATCAGTGTCAGTGGGAGACAGAAGAATGTTCAGCCATCAAAATTCAAACAGCTTTTAGAGGTTACCTAGCTAGGAAAGCTTTGAGGGCATTGAAGGGAATAGTGAAGCTTCAAGCAATCATCCGTGGAAGAACGGTAAGACGCCAAGCTATGAGTACTCTGAAGTGCTTGCAATCCATTGTAAGTATTCAATCACAGGTCTGTGCAAGGAGACTCCAAATGGTGGAAGGAAAATGTGAATGTGATGAAAATGAAGGCATGCAAGGGTCAAAAGACAAGATAATAAGGATGGACTCAAACAGGGAAAAAAGGTGGGATGATAGCATTCTATTGAAGGAAGAATTAGACGCCTCTTGCATAATCAAGAAAGGAGCAGCTCTTAAGAGAGAAAGAATAAAGGAATACTCATTTAACCATAGAAGATCAGCAGAATCAGAAAGAAAGAAAATAAATGGAAGATGGAGGTACTGGCTGGAACAATGGGTAGACACACAACTTTCCAAAAGTAAAGAACTTGAAGATTTAGACACAGTTTTCAGCTCACATTCTAGAGATAATATTCAGAGACACAATCAAGTTGAAAGATTAGATTCTCCAATAGTTGCTCCAAAAAAGTCTTTTCCTTACACAAATAAGAGTAGTTCAGAAGGAGAAAATCGTTCATTTCCAAACTCTCCTAAAATTCCTACATACATGGCTGCAACAAAATCAGCACAAGCAAAAGTTAGATCAACAAGCTCCCCAAGAGTAAGGACAGGAGTGCATTTAGATATGAACTCTAATAGCAATTCACCATGCAAGAAAAAGCTATCAGTTGTAACTTCTATTAGCACTGAAGTGCTCAATAATGGTAAGATTGTTAAGTTGAGTAGTACTCAACAAAGATCTCCAAGTTTAAAGGGTATTTCAAGGCCTATAAAATCAAACCAGACAATGAAGGATTTCAGCATTAATTCAGACTCCTCAATGCTTAATTGGGATCAACAAAGTTTCTTCAAATGA 1257 0.3874 MRSWFIQVKRLFIWDTPSTSEKKDRRRKWMTLPSIKAPSPSKETRICEAEEEHSKKALTVAIASAAEAAITAAHVAVEVVRLHSAHQCQWETEECSAIKIQTAFRGYLARKALRALKGIVKLQAIIRGRTVRRQAMSTLKCLQSIVSIQSQVCARRLQMVEGKCECDENEGMQGSKDKIIRMDSNREKRWDDSILLKEELDASCIIKKGAALKRERIKEYSFNHRRSAESERKKINGRWRYWLEQWVDTQLSKSKELEDLDTVFSSHSRDNIQRHNQVERLDSPIVAPKKSFPYTNKSSSEGENRSFPNSPKIPTYMAATKSAQAKVRSTSSPRVRTGVHLDMNSNSNSPCKKKLSVVTSISTEVLNNGKIVKLSSTQQRSPSLKGISRPIKSNQTMKDFSINSDSSMLNWDQQSFFK 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0715 418 MobiDBLite consensus disorder prediction 376 397 - -
Lal20g0715 418 Pfam Protein of unknown function (DUF4005) 297 382 IPR025064 -
Lal20g0715 418 ProSiteProfiles IQ motif profile. 93 121 IPR000048 GO:0005515
Lal20g0715 418 PANTHER IQ-DOMAIN 5-RELATED 2 404 - -
Lal20g0715 418 ProSiteProfiles IQ motif profile. 117 144 IPR000048 GO:0005515
Lal20g0715 418 MobiDBLite consensus disorder prediction 292 352 - -
Lal20g0715 418 Gene3D - 93 143 - -
Lal20g0715 418 SMART iq_5 115 136 IPR000048 GO:0005515
Lal20g0715 418 SMART iq_5 92 114 IPR000048 GO:0005515
Lal20g0715 418 PANTHER IQ-DOMAIN 11 2 404 - -
Lal20g0715 418 Pfam IQ calmodulin-binding motif 117 134 IPR000048 GO:0005515
Lal20g0715 418 Pfam IQ calmodulin-binding motif 95 114 IPR000048 GO:0005515
Lal20g0715 418 MobiDBLite consensus disorder prediction 288 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0715 Lal-Chr20 6898326 6903258 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0715 5 418 IQD Protein Family AT5G13460 44.072 1.49e-99 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0715 - - gmx:100800192 535.028