Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0675 ATGCTTAGTAATCTATATATGCCTCAGCTTGATAGATTCGGTTTTGTGTGGGGGTGGAATGAAGAATCGTGTTCCTTGGGATTGCAACAAGCTCTTGATACCAATTTGTTCAGTTTGGATGTTGTGGTGGGGAAAACTGACTTCTGTATAGAAGTCGGTTTGGCAAAAGCTGGTTTTTTGGTTGGGATACCGACTTCTAGACAGAAGTCGATGGCTGATGAAATGAATAATAATGGTGAAAACTATGAGGGTGTAGATGAAATTGATGCTAGTGAAGATGCAAATGTTAATGAAGGATATGAGTTTGATTTTGAAGAAATTGATTTTGGATCATTAAACGAATATGAAGTAAAGAAATATAGAGAGGGATTTAGGGATAAGAAAAATGAATTAGTTCGAAAAAGGGCTCCAATAAAAGAAACGAGATGTGGTTGTTTAGCAAGAATGAAAATTCACATTGACAAGGAGAAATGTGATTGGTATGTGAGTTATTTTGTTGATGATCATAATCATGAATTGGTTGGCGAACATTATGGTGGGATGATAGCCTCAAACCGAAGTATGACACAAACATATGTCGCACAGATGAACACAATGAGAGAAGTTGGTATTGGAACAGGCAAAATTTTTAGTTCATTCGCTGGTCAAGCTGGTGGATATGGGTATATTGGATTCTTTAAGAAAGATATGTATAATCAAATTCAGAGACAAAGAAGAATAGGAAATGCTTTTGATGCAACCTATGGTCGAAACAAGTACAAGTTTTCAGTGGTCATTTTTTCTTGTGTGAATCATCACAAGAAAACAACAGTATTTGCTACTGGTATTGTGTCTAACGAGACAGAGGAAATCTACGTTTGGCTTTTAGGAAATTTCTTGGAGGCAATGAATGGGAAACATCCAAAGTGTGTTATCACTGATGGTGACTTGTCGATGAAGAATGCAATCAAAAGGGTTTTCCCTACAGCTCATCATAGACTATGTGCTTGGCATATACGAAACAATGCTGGGAAAAAAATAAAGAATAATAACTTTCATAAGGACTTCCAGAAAGTTATGTATGCTGATGTTGAGATTGATGATTTTAATATGATGTGGGAGGAACTTATTCTAAGCATGGACTTTGTAATAATGTTTGGGCATCTTAGATATTTGATTCCAGAAGTATGTGGGCTAGGTCATACATTCGAGGAAAGTTCTATGCTGGTTTGCATACGACATCACGTTGCGAGGGATTACATTCACAAATGGGGAGATATATAG 1263 0.365 MLSNLYMPQLDRFGFVWGWNEESCSLGLQQALDTNLFSLDVVVGKTDFCIEVGLAKAGFLVGIPTSRQKSMADEMNNNGENYEGVDEIDASEDANVNEGYEFDFEEIDFGSLNEYEVKKYREGFRDKKNELVRKRAPIKETRCGCLARMKIHIDKEKCDWYVSYFVDDHNHELVGEHYGGMIASNRSMTQTYVAQMNTMREVGIGTGKIFSSFAGQAGGYGYIGFFKKDMYNQIQRQRRIGNAFDATYGRNKYKFSVVIFSCVNHHKKTTVFATGIVSNETEEIYVWLLGNFLEAMNGKHPKCVITDGDLSMKNAIKRVFPTAHHRLCAWHIRNNAGKKIKNNNFHKDFQKVMYADVEIDDFNMMWEELILSMDFVIMFGHLRYLIPEVCGLGHTFEESSMLVCIRHHVARDYIHKWGDI 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0675 420 Pfam MULE transposase domain 244 335 IPR018289 -
Lal20g0675 420 Pfam FAR1 DNA-binding domain 120 174 IPR004330 -
Lal20g0675 420 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 122 221 IPR031052 GO:0006355
Lal20g0675 420 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 244 369 IPR031052 GO:0006355
Lal20g0675 420 PANTHER OS02G0262500 PROTEIN 244 369 - -
Lal20g0675 420 PANTHER OS02G0262500 PROTEIN 122 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0675 Lal-Chr20 6314787 6317969 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lal20g0675 MULE 4.1e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0675 - - lang:109327968 365.54