Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0672 ATGGTTTTAGGTGTATCAGATGTGTCAACAATATGTGGGGGAAAGTTAGGTACCCTTATTTTTGAAGTGTCTATAAACTTTGCATTATTTATTACAATGGTGATTTTGTGCAATGGTTTACATTTCATGCTAAAGCCTTATTCACAACCACGCATTACTTCAGATATAATTGTAGGACTAACTCTAGGGAACATTGTATATGTAAGAAATCTATTTGATAAATTCAACAAGGCCTTTGGATTCATCATTGATTTTGGTATGATGTGTTACATGTTTGCATTGGGTATAGAAATGGATTCTCATGTACTCTTCAAAAGACCAGTTAGACAAATTAAAGCTGCTTATGGAGGACTAGTTGTCACATTCATCTTAACCGCTTTAACATCGCCTTTCTTGGTATACTTCGACGAACATAAACTACTCGAATTTACACTATGCCTTGCTACTACTGTTTCCAGCACGGCCTCGCCTGTCCTGACCCGATTAATAACTCATCTCAAAATAGGCAAGTCTGATATCGGAAAGATTGTAATTGCTGGAGGAATGCACTTAGATTTTATAGGCTCCCTGCTCCTTTCGATCGGCTACATATTTATTCCATTGGCTTTATTTTGCAATGACTTGGAAGCATCGCAAGGCATTTCGAAAGCGCTTATCATGGCAGGTGCAGTTTTGGGACAGACAGCATTCACAGCAAGTTTTTCACCTGCTTTTATGAATTGGGTTAACAGTGAAAACCCAGAAGGTAGACCAATGAAAGGTTCACATATTATACTGGCTATTGCCTTCATGGTCTTAACATGTTCCTTCTCAACTTTGTATGATTTTAGTCCACTTTTAAGTGCTTTCCTAACAGGTGTTTGTTTACCTAGAGAGGGCAGAGTTTCCAAATGGGTTATCACCAAAATCAATTATATGTTGACTACAATATTTTTCCCCATATTTTTCTTGTGGGTGGGGTATGAAGCCGATTTCAGGAAGTTTAGACCCGGAAGTCGCGCAACATGGGCAAGATTGTTTACACTTATCATATTAGGAACAACAGGTAAAGTTGTTGGAACAGTTATTTCTGGGGCAATGCTGGGGTTCAATTGGCCTGAATCTGTTGCAATAGGGTTGCTCCTTACCACCAAGGGACACTTACATATCTACTTGGCTGCCAAAGCAATGCATTGTGGTGCAAATACTTCTACAGGCATTGGGATGATAATTGCAATCTTTTTCACAGTTGTGCATGGTCCAGCAGTTGTGTCGAATATCATCAAACGCGCACGGAAAAGGGCACCTAGTCATCACATGGCCCTCCAATTACTTGATCCAACAAGTGAACTAAGGATCCTCCTATGCCTTCATGGACCTCAAAATGTTCCTTGTTCAATAAACTTCATGGAGATCTCAAGAGGGTCTTCAGACCCTGGCATTCTCGTATATGTCGCGGACATGATTGAGCTCACCGATGACATATCGGCCACGTTAGATAAGGATGAAGGAGTACATAAAACCACTGTTAAAGACAAGGAAGTGATGGATATGAGAGACCAAGTTACCAACTCATTCAAAACTTATATGGCAGAAAATAGTGATGGTATTACTCTTAAAAGAACTATGGCACTTTCAACAATCAATAACATGCCACAAGATATCTGTGTTTTAGCAGAGGACTTGATGATTGCCCTCATTATACTACCATTCCATAGGAGCCAGCGTTCGGAGGGAACCTTGGATGGTGGTAATCAAGGGTTCAGATATGTGAACCGGAAGGTACTGAGAAGTGCTCCTTGTTCTGTTGGGATTCTAGTAGACAGAGGCTTCAGTTCCATCGATAACATATCATCATCTCAGGTAACAATCAATGTGGCAGTGATATTCATTGGAGGAAAAGATGATAGGGAAGCACTTGCATATGCTAGCCGCGTAGCGCGACATCCGAGAGTAAAACTCACAATAATAAGACTCTTGGTAGATCCAAATGCAGAATCCTCAAGATTAGTAGGGTATAGGGTCATCCTTGAAGAGCAGCAAAAGGAGATGAAGTTGGATGATGAATACTTTGCACAATTCTATGAAAAACATGTAGTAGGAGGTCATATGTCATATACAGAGAAGCATCTTGCAAATGCTGCTGAAACTTTTTCTACTCTAAGATCATTTGAAGGACAATACTCATTGGTCATTGTAGGAAGAGAAGGAGGGTTGAACTCTATATTGACAAAGGGAATGAATGATTGGCAACAGTGTCCTGAATTAGGACCTATAGGGGATGTTCTTTCAGGACCAGATTTCTCAATGACTGTATCTGTGTTGATCATTCAACAACACAAAGTTAAAGGAGATCTTGATGGACTTGATGATGATTTTTCTATCATGTAG 2370 0.3992 MVLGVSDVSTICGGKLGTLIFEVSINFALFITMVILCNGLHFMLKPYSQPRITSDIIVGLTLGNIVYVRNLFDKFNKAFGFIIDFGMMCYMFALGIEMDSHVLFKRPVRQIKAAYGGLVVTFILTALTSPFLVYFDEHKLLEFTLCLATTVSSTASPVLTRLITHLKIGKSDIGKIVIAGGMHLDFIGSLLLSIGYIFIPLALFCNDLEASQGISKALIMAGAVLGQTAFTASFSPAFMNWVNSENPEGRPMKGSHIILAIAFMVLTCSFSTLYDFSPLLSAFLTGVCLPREGRVSKWVITKINYMLTTIFFPIFFLWVGYEADFRKFRPGSRATWARLFTLIILGTTGKVVGTVISGAMLGFNWPESVAIGLLLTTKGHLHIYLAAKAMHCGANTSTGIGMIIAIFFTVVHGPAVVSNIIKRARKRAPSHHMALQLLDPTSELRILLCLHGPQNVPCSINFMEISRGSSDPGILVYVADMIELTDDISATLDKDEGVHKTTVKDKEVMDMRDQVTNSFKTYMAENSDGITLKRTMALSTINNMPQDICVLAEDLMIALIILPFHRSQRSEGTLDGGNQGFRYVNRKVLRSAPCSVGILVDRGFSSIDNISSSQVTINVAVIFIGGKDDREALAYASRVARHPRVKLTIIRLLVDPNAESSRLVGYRVILEEQQKEMKLDDEYFAQFYEKHVVGGHMSYTEKHLANAAETFSTLRSFEGQYSLVIVGREGGLNSILTKGMNDWQQCPELGPIGDVLSGPDFSMTVSVLIIQQHKVKGDLDGLDDDFSIM 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0672 789 Gene3D - 25 430 IPR038770 -
Lal20g0672 789 PANTHER CATION/H + ANTIPORTER 11 787 - -
Lal20g0672 789 Pfam Sodium/hydrogen exchanger family 30 414 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Lal20g0672 789 PANTHER CATION/H+ EXCHANGER 3 11 787 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0672 Lal-Chr20 6292867 6296771 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0672 6 789 Antiporter Super Family AT3G52080 48.065 0.0 758
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0672 - - cam:101501359 1100.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0672 20 6292867 6296771 Lal20g0672 20 6292867 6296771 ECH