LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal20g0595	ATGGCTTATCGACGTAGCCTGTTGATAAGAGGGAACCTAGATCGGAAGTGCCACCCGTCTCTCAGTTATGTCATCCATAGTGATGAAAGGAAACATGAAAACCCAAATGAAAAATCAACTTCAGTAGGCATTAGTAGTTTTATCCAAACAAGGTCCTTTGGTAGCTCTCTTAATGGATCTATGGGGTTCGGTACCTCTTCTCGAGATAGAATGCTTTCAAACAGATTCCTTTCTCCGTGCTCTGGGTATAATTTCTGCCGATATATGTCAACAGTCAATCAGGGGTCAGATAATATTGATATAATAACTGACGTAGCAGAGGTTCTTTCTGACACAACTATGGAAGTTGTAGCTTCTCAGGCTCCCATTGTTAATGAAGTTGCAATTGCTGCTGCTGATTCATTTTTACCTGTGAAGTTCTTGCAGTACACTATAGATGCTGTGCATATCACCTCTGGCTTAAACTGGTGGGCAGCCATAGTTCTAACAACCTTCGTGATTCGAAGCGCAACAGTTCCACTTTTAATAAATCAGCTTAAGGCCACTTCTAAGCTTACGCTAATGAGACCTAAGATGGAGGCGATAAGGGAACGGATGCAAGATCAGGCTATGGATCCTGCAGCTGTTGCTGAAGGTCAGAGGGAATTCAAGAAGCTATTCAATGAATATGGTGTGAGTCCATTTACGCCATTGAAAGGGCTCTTCATTCAAGGTCCTATAAACAATATGGCTGAGAAGGTGCCATCATTTAAGCAAGGAGGAGCCTTCTGGTTTATGGATCTCACCACTCCAGATACCTTATACGTTCTTCCAGTTTTGACTGCATTATCATTCTTACTAACAGTAGAGTGTAATATGCAAGAAGGCTTGGAAGGAAATCCTATGGCTGGTACCATGAAAAATGTCTCTAGGGGTCTTGCTGTTCTTACAGTCCCTTTTACCATGGGATTTCCAAAGGCTATATTTTGTTACTGGATTACATCAAATTTGTTTTCGCTTGTGTATGGACTTGTGCTTAAAGTTCCTGGGGTAAAGAAAACTTTGGGTCTTCCTGAAATGCCTGCAGCAGCACCTACTACTACCAGTGCTCCACAATCTCCATTTTCTATATTTCCAGCACTGAAAAAAGCTGTTTCTATGACAAATGGGTCAAACTCATTGCCAGATGAACCATCAAAACATTCAGAGAAAAAAATATCTTCTTCTTCTTCTGTTATCAGTCAAAGGCTTAGAAGTCTAGAGAAACAAGTGAAAGGAAGAAAGAAAAGTAACAAAAAGTGA	1281	0.4083	MAYRRSLLIRGNLDRKCHPSLSYVIHSDERKHENPNEKSTSVGISSFIQTRSFGSSLNGSMGFGTSSRDRMLSNRFLSPCSGYNFCRYMSTVNQGSDNIDIITDVAEVLSDTTMEVVASQAPIVNEVAIAAADSFLPVKFLQYTIDAVHITSGLNWWAAIVLTTFVIRSATVPLLINQLKATSKLTLMRPKMEAIRERMQDQAMDPAAVAEGQREFKKLFNEYGVSPFTPLKGLFIQGPINNMAEKVPSFKQGGAFWFMDLTTPDTLYVLPVLTALSFLLTVECNMQEGLEGNPMAGTMKNVSRGLAVLTVPFTMGFPKAIFCYWITSNLFSLVYGLVLKVPGVKKTLGLPEMPAAAPTTTSAPQSPFSIFPALKKAVSMTNGSNSLPDEPSKHSEKKISSSSSVISQRLRSLEKQVKGRKKSNKK	426

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lal20g0595	426	TIGRFAM	yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family	155	337	IPR028055	-
	Lal20g0595	426	MobiDBLite	consensus disorder prediction	380	426	-	-
	Lal20g0595	426	Pfam	60Kd inner membrane protein	156	337	IPR001708	GO:0016021\|GO:0032977
	Lal20g0595	426	PANTHER	OXA1	72	400	IPR001708	GO:0016021\|GO:0032977
	Lal20g0595	426	PANTHER	MITOCHONDRIAL INNER MEMBRANE PROTEIN OXA1L	72	400	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lal20g0595	Lal-Chr20	5234321	5243672	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lal20g0595	136	370	Chloroplast and Mitochondria Gene Families	AT2G28800	27.419	1.87e-11	63.5

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lal20g0595	K03217		-	gmx:100817052	627.091