Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0592 ATGCCTAACAAAAACTGTAGCGGCAAAGACAAATATAAGAGAGGAGATGGCAATGACCACAAGGAGGTCACCACCGTCAAACGCCGCTCTTCTGGCCGGCCCCGGGGCTCAAAAAACAAACCAAAACCACCAATTATCATAACCACAGAGAGCCCTAGCGCATTCAAAAGCACTGTCTTTAAGTTTGCAACTGGAGTCGACATTGCTCAAAGCTTGATTTCCTTTTGTAACACCCATCAAAGAGGATTATGTATTCTAAGCGCCACCGGAATTGTCACTGACGTCACTCTCCGGCAAGCTGATGGCACCATCATGGTGTTTCGTGGCCAATTTGCTATAATAATCATGAATGGTTTGTTTGTTCCACCAGGATCATCACCATCTGGGTTAACTAATTTAACCGTTTTCCTCGGTAGAGGTCATGGAAGAATGATTGGCGGAAAAGTGGTGGGACCGTTGGTGGCTTCAGCACCAGTTATGGTAATGGCTGCTACTTTTTCTAATGCAATCTATGTCACAAACCCTTTATCCAATGACGAGGATCGGTTATTCGGCAGTTTTGGTGGTGGTGGTGATGACGACAATGCTTCTTTCAGATCAGAAGTGAAGTGA 612 0.4542 MPNKNCSGKDKYKRGDGNDHKEVTTVKRRSSGRPRGSKNKPKPPIIITTESPSAFKSTVFKFATGVDIAQSLISFCNTHQRGLCILSATGIVTDVTLRQADGTIMVFRGQFAIIIMNGLFVPPGSSPSGLTNLTVFLGRGHGRMIGGKVVGPLVASAPVMVMAATFSNAIYVTNPLSNDEDRLFGSFGGGGDDDNASFRSEVK 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0592 203 MobiDBLite consensus disorder prediction 1 46 - -
Lal20g0592 203 PIRSF ESCAROLA 2 203 IPR014476 GO:0003680
Lal20g0592 203 SUPERFAMILY AF0104/ALDC/Ptd012-like 53 175 - -
Lal20g0592 203 Pfam Plants and Prokaryotes Conserved (PCC) domain 58 168 IPR005175 -
Lal20g0592 203 Gene3D - 56 178 - -
Lal20g0592 203 ProSiteProfiles PPC domain profile profile. 52 190 IPR005175 -
Lal20g0592 203 MobiDBLite consensus disorder prediction 7 29 - -
Lal20g0592 203 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 18 182 IPR014476 GO:0003680
Lal20g0592 203 CDD DUF296 59 166 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0592 Lal-Chr20 5220275 5220886 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0592 23 181 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 49.689 1.30e-40 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0592 - - lang:109347191 264.618