Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0591 ATGTCAAGATCATACCTTGTTCTATGCTCTCCATGGTTAATACACCCCATCACAAACCATAGCATTATATATAGGTTAATATACCCCAAGAGTTTCTACATTGTTTTCATTTTCTTATTCACAATCATGTCTAACAAAAAGTATAAGAAAGGTGATGATAAAGAGATTAACCATGACCACACGGTGGTCGCCACCGTGAAACACCGCTCTTCTGGCCGTCCTCAGGGTTCAAAAAACAAACCAAAACCACCAATTATTATAACCACAGAAAACCCTAATGCAATCAAAAGTCATGTATTTGAGTTTGAAAGTGGAGTTGATATTGCTGAAAGCTTGCTTTGTTTTGCTAGCACTCGTCAAAGAGGATTATGTGTTCTCAGTGCCACCGGAACTGTCGTCAACGTCACTCTCCGGCAGGAACATGGTGCTACCATGGTGTTGCGTGGCCAGTTTGGTATAATAATCATGAATGGTTTGTTTTTTCCATTAGGATCGTCTTCATCTGGATTAACTGTTTACCTCGGCCGAGGGCAGGGAAGAATGATCGGCGGCACGGTGGTTGGACCGCTGGTGGCTTTGGGTCCAGTTATAGTAATGGCGACTACTTTCGCCGATGCAATCAATGTCAGATTACCTTTATCCGATAAGGACAATGATGATAACGAGCAAAATTGTGGTTGTGGTGACAATTACATTCCTTCTTGA 705 0.4199 MSRSYLVLCSPWLIHPITNHSIIYRLIYPKSFYIVFIFLFTIMSNKKYKKGDDKEINHDHTVVATVKHRSSGRPQGSKNKPKPPIIITTENPNAIKSHVFEFESGVDIAESLLCFASTRQRGLCVLSATGTVVNVTLRQEHGATMVLRGQFGIIIMNGLFFPLGSSSSGLTVYLGRGQGRMIGGTVVGPLVALGPVIVMATTFADAINVRLPLSDKDNDDNEQNCGCGDNYIPS 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0591 234 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 55 220 IPR014476 GO:0003680
Lal20g0591 234 Gene3D - 95 217 - -
Lal20g0591 234 MobiDBLite consensus disorder prediction 65 85 - -
Lal20g0591 234 CDD DUF296 96 203 IPR005175 -
Lal20g0591 234 ProSiteProfiles PPC domain profile profile. 92 226 IPR005175 -
Lal20g0591 234 Pfam Plants and Prokaryotes Conserved (PCC) domain 97 204 IPR005175 -
Lal20g0591 234 SUPERFAMILY AF0104/ALDC/Ptd012-like 92 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0591 Lal-Chr20 5209873 5210941 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0591 67 206 AT-hook Motif Nuclear Localized (AHL) Family AT3G60870 52.113 7.18e-43 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0591 - - lang:109347191 213.772