Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0523 ATGCCCTTATTCATCTCCGACGAAGAGTTCTCCCGGTGCTCCGGTGATACCGCCACCGTCGCTGCAAAGGCCGACGCCTTCATCCGAGGCCTCCTCCACGACCTCGACACCGTTCGCGCTAAGGCTGATGCCGCTGACATCAACGCCGAGCAGAACTGCTCTCTCATCGAGCAGAAGTATCTCTCCCTCGCTGCCGACTTCTCCAAGTTCGAGTCTCTGGTTTCGGAACTCCAATCCTCCCTTGATCAACGGCAACGTGAACTCGCGGAAACACAATCTCAGAATCATCAATTTCACTTGCAATTGGTTGAGAAGGATAGGGAAATAGAGAGTTTGAGGACGGAGGTGGGGGAACTTCATAAGTCCAAGAGGCAGTTGATTGAGTTGAATGAGCAGAAGGATTTGGAGATTAGCGAAAAGAATACAACCATCAAGAGTTATCTTGATAAGATTGTGAATACTTGTGATGATGCTTTCTTTGTTGTGTTTGATGGTGTGGTGTTGTTGAAGGTCCGTTTGACTGAAAATGCTGCTCATAAAGAGGCCTGTTTGAGCGAAGTTGAGGCTGAGTTGGGGCGATTGCGGTCTGCTTGCACCCGATTCCAACAGGAGAAGGATATTCTTGAGAGGCAGAATGCTTGGCTTAATGATGAATTGACTGCTAAGGTTAACAGTTTCTTTGAGCTCCGTCGAAAACACACAGAGTTGGATGCTGATAAGTCTTCGATGCTCACAGATGTCGAGAGACAATTCAGTGAATGCTCTAAATCTCTACTGTGGAACAAGGATAGGGTGAGGGAGCTAGAAGTGAGGCTTAAATCTACCCAAGAGGCATTAATTTCTGCTAAAGATGCTGCTGCCGCCAATGAAGAGCGATTATCTGCTGAACTCTCCACTGTTAATAAGCTAAATGAGTTGTATAAAGAGAGTTCTGAGGAATGGTCAAGAAAAGCCGCAGATCTAGAGGGTGTGATAAAAGCGATGGAGTTACACCTAAAACAAAGTGACGATGTTTACAAAGAGAAGCTTGAGAAGGAATTATGTGCTAGAAAACAGGTTGAAAAGGAGGCTGCCGATTTGAAGGAAAAGCTTGAGGAGTGTGAAGCTGAAATTCAGACAAGGAAAAAGACGAATGAGTCTAATAATCTTCAACTCACCAGTTTTACTGCTGATCCGTGGTTTGCATCAATTGAAGTTGATAACATGGTTGATGAAAATAGCGTGATAGTCCCAAAAATTCCTGTTGGTGTTTCTGGAACAGCATTAGCTGCTTCACTTATGCGAGATGGATGGAGTATGAATATTCTCACTGTCTCCCTCTATTTCCTGAAGTTGGCCAAAATGTATGCAAAATACCAAGAGGCTGTTGATGCATTGAGGCACGAACAATTGGGCAGGAAGGAGTCAGAGGCAATTTTGCAACGGGTTCTGTATGAGTTAGAGGAAAAAGCAGAAGCCATTGTCGATGAAAGAGCGGAACATGAAAAGATGGCTCACGCATACTCATTGATGAACCAGAAATTACAGAACTCTCTCACTGAAAACACTTATTTAGAGAAAACCATCCAGGAACTGAAGGCTGACCTCAAAAGGAGTGAACGGGATTATAATCTTGCCCAGAATGAAATCAATGACCTTCAAAAACAGGTGACTGTACTTTTGAAGGAATGCCAAGACATACAACTTCGAGGTGGGTCAATTGAGTATGATATTGTTGATGTTACTGCAAATATTACCTCAACGACAACTACAGAGACTGAAGCTGAAAACGTCATCTCAGAGCACCTTTTAACTTTCAAGGACATTAATGGACTAGTCGAGCAGAATGTCCAACTTAGAAGCCTTGTACGCAGTCTTTCTGGCCAGATTGAAAATCAGGAGGTGGAATTCAAGGAGAAGCTTGAAATGGAGCTCACAAAACATACTGAAGCAGCTTCTTCTAAAGTTGAGTCTGTTATGCAGAGAGCCGAAGAGCAAGGGCGTATGATTGAATCCCTTCATACATCTGTTGCAATGTACAAGAGGTTGTATGAGGAGGAGCATAGTAATAAGCTACCTCACTCTCATTCTTCAGAAGCAGTTGCAGCTGTTGCAGAGGTTGGTAGAAATGATCTTAAGGCTTCGATTGAAAGCTCACAGGAAGACGCTAAGAAGTCTCTTGAAAAAGTTGCAGAGCGTGTGAAATACCTTGAGGATGATTTAGCGAAGTCTAGGAGTGAAATTATTGTATTACGATCAGAACGAGACAAGATGGCACTTGAAGCAAATTTTGCTAGAGAGAGACTTGAGAGCTTTATGAAAGAGTTAGAACACCAGAAAGCTGAAGTCAATGGCATTTTAGCTAGAAATTTGGAATTTTCTCAGCTAATTGTCGATTACCAACAAAAGCTGCGTGAAAGTTCTGAGTCACTAAGTGCCGCCGAGGAGCGTTGTCGGAAACATTCTATGGAGTTGTCTGTTTTAAAGCATGAAAAGGAAATCTTATCAAATGCTGAAAAGAGAGCATCTGATGAGGTTCAAAGTTTATCTGAAAGGGTGCAGCGCTTGCAGGCTAGCTTGGGTACCGTACAGAGTGCTGAAGAAATTCGAGAGGAAGCAAGAGCGTCACAGAGGGTTAAACACGAAGAATATGTAAAGAAATTGGAGAAAGAATGGGCCGAGGCTAAGAAAGAGTTGCAGGAAGAGCGGGAAAATGTGCGGAGACTCTCACTAGATCATGACCAGACATTAAAAAATTCTCTGAGACAGGTTGAGGATATGAGCAAAGAGTTAACTAATGCATTGCGTGCTGTCACATCTGCAGACTCTAGAGCTGCTGCTGCTGAGGCTAATCTTTGCAGTCTTCAAAGAAAAATGGGTTCCACTGATGATGATAAGGTTGTTGAAATGGATGGTGTCAGTCGACCTTCCACTATGTCCAGTGATGAGTTATCTCCTTCCGCTGCTTCACTGATTGATACGGTGTCGACGCCATTGGTTCTTCCGATGCCGCCGATGAAATTTAAGGCGACGAGTTATCTCGTCCGGAGACGCTTCATGATGGTTGTTGCTGAATTGCAAGCTGCAAAGGAGGAGATAGAAAAATTGAAAGAGGAAACACATGCTAACAAAGCTCACATGCTTCAGTATAAGGGCATTGCTGAGGTGAATGAAGATGCATTGAAACAGATTGAAGTTGCACATGAGAACTATAAGATAGAGTCTGACAAAGCAAAGAAAGCACTAGAAGCTGAACTTCGTTCACTTAAAGAGAAGGTTTCGGAGCTTGAAAATGAATGTAGTTTGAAATCTGAAGCAGTGGCTTCTGCAACTGCTGGAAAGGAAGAGGCTCTGGCATCTGCTTTTGCTGAAATTACAAATCTGAAGGAAGAAATATTATCCAAGTCTTCTCAAATTTCAGCAATGGAAATTCAGATCTCTGCCTTTAAAGAACACCTGGACAAGGAACACCAGAGATGGCACACAGCTCAAAAAAATTATGAAAGACAGGTTATTCTCCAATCTGAAACAATTCAGGAGTTGACAAAAACATCTGAAGCTCTAGCCTTACTGCAGGAGGAGGCTTCTAAATTACGTAAATCAACTGATGCTCAAAAAATTGAAAATAGTGAACTAAAGGCTAAGTGGGAAGAGGAGAAGGTAGCGCTGGAGAAGGCTAGGAGTGATGCTGAGAAGAAATATGATGAAATCAATGAACAGAATAAAATACTGCATAGCCAACTTGATGCTTTGCACATTCGGTGGGCTGAGAAGGAGCGTAGTTATGCCGGTGTTTCATCTGGAAGCAGTAGTGCAGATTTATTTGGTGATGCCAGCCTTCAGAATGTGATTAATTATCTTCGACGTTCGAAAGAAATTGCAGAAACAGAAGTTTCATTGTTAAAACAGGAAAAGCTGCGATTACAGTCACGGCTTGAGAGTGCTCTGAAGGCAGCAGAGTCTGCACATGCAAAACTAGAAGCTGAGCGTACAAAATCAAAATCATTTTTGTTCACTGAAGAAGAATTCAAAGCGTTGCAGCTCCAGGTTCAAGAAATGAATTTACTTCGTGAGAGTAACATGCAGCTCAGGGAAGAAAATAAGCACAATTTTGAGGAGTGGCAGAAATCATGTGAACTAGCGCAAAAGGCAAGAGCTGAGATAGAGAATCTTGAGAATCTTCTGAGGCAAAATGAAATTGAGCTGGAAGGTCGTAAGAATGAAATTGAAGCACTAAAAATGGAAAAGGACCATCTTAATCACAAGTTGATGGAAAGGAGTAAAAATGTTGATGTGGAGGATTATGATCGAGTGAAAAAACTTGTTAGAGATTTGCAGGATAAACTAAGAGATAAGGATGTCAAGATAGAGGAGTTTGCTAAAATTGTGTCGGAGAAGCAGGTTTATGTTTCCCGTCTAGAGCAAGACCTTTCAAACTGTAGATTGGAATTTACTGAGAAAGAGAAGAGAGTTAACGATATTCTGCATGTTGAGGCTAGCCTAAAACTGGAGGCGGAAAAGCATAGGAAACTGTTGGTTCAGTTTAAGAAGAGGATTGATGTTTTGTCAAGGGAAAAGGAAGAGCTGGGAAAAGATAATCAGCAACTTGCTAGGCAATTGGATGAAATCAAGCAAGCGAAAAGGCCAACCAGTGATACAACTGGTGAACGTGCAATGAAGGAGGAAAAGGACACCAGAATACAGATTCTGGAAAAACATCTGGAGCGTTTGAGAGATGAGTTAAAGAAAGAGAAAGAAGACAATCGCGTCGAGCGAAGCAGACGGCTGAAGACTGAAAAGGCTATAAAGGATTCTTACAACAATGTTGAGCAGGAAAAAACCAAGTTTATTAATGAACTTGAGAGGCATAAGGAGGCTTTGAAACAGTTATCCAATGAAGTCGAAAAGCTTAAGATTGATCTGAGCAATCTTCCTGAGGGATTGAATGCGGCTCAACTTTTTTCTGGATCCAGTGTTGATGACTTTGTTGCTCCATATGTATCTGCTGTTGAAAATTTTGAGAAGGAATCTCAGTCTATGTTTTCTGAGCTTGGAGGTCGTGGAAATCTTGGAGATACATCAACAGTACCAGACAGTTCAGCAACTGCTACAGGTTCTCTAGTCCATGCTCAGCCCCCTGGCTCTACATCCTTGCTGGTCCCTGGAGAAAGCAGTTTACCACCTAAATCCATGGGAGATAGTGAGAGGAGACTTGCATTGCCCAGAGCTGGTGTTGACGCCCGTAAAGCAGGTAGGAGATTGGTCAGGCCTCGTCTAGTAAAGCCTGGCGAGCCACAAGGTGATGCAGAAATGTCTGATGCTGAAGGACCTGGGGGAAAGCCTGGGCCTTCTGGTGACACAGAATCCCAAAGCAGTGCCGCTCTATCGTTTCAACCATTAGCTCGTAAACGCGTTGCTCCTACACCCTCTTCTGAATTACATGAAGAATCAGCCACACTTGAGAAGAGCTCTGATGTAGTTGCACCAGTTTTGAAGAAGTCAAAAGGATCAGAGTCCCCTGAAGTGAGTGCTGAAGAACAACCTGCTGCAACTCCAGAATTCACTGGAAGTCATCCAATCAATGAAGAATCATTTGATGGGGGTGAATTACCACAAGGCCAAAATGAGGAAGCCGGTGAAGCTCAGAATGAAGATGGCGAGTTTGCTGTAGACAGGGATGAGGAATCCAAGGATCCACAGCACATGGATGATACTAGTCAAGAGGAATTACATGGTGACAGAACCAGCATTTTAGAAGAGAATCTGGACCAACCAGCTGAAACAAAAGTGGTGACTGATGATGTGCAAAGGGATCACAGGGAGCCAGACAACCAACAGTCAACATTGGCACCAGGTAGTGAGAGAGAAGAGGGAGAAATGTTTCTAGACAGTGGAGATCTTGAAGGTGGTAGTGATTTATCTAACATCGCTGAAAACCAAGATTCCCGTGAAGGTCAACCAGAGCCTGCTGCAAGCCCCGAACCTTCTCCGGCGAGGGCTGATGATGAAGCTCTAGAGGCTGGTGAGATTTCTCCTGAACGTTCAATGGATGATAAGATCGATGAGGGTGACATAGTCGAGGAGAGTGTTGATGTTACTGACCCAACTGTAGTTGAAAGTGATCAGGTTGCCGACCCAGCACCTGTTGCAGGTGAGAGCAGTTTAACAGGTAGTGCTGCAGAAACTAGTTCCTCAAAAACGAACTTGCCTGTTCCAAAGCAAGGGACTAACTCTGAAACAGAAGATACAAAGCAGCAGCAGGCATCACCTCCTAGTATGTCAACAACCATTAACTTGTCTGAGAGAGCCCGCCAGAGGGCTCAGTTGAGAGAAGCTGGTAGAGGTCGTGGAAGAGCATCTCCTCGTGGTCGAGTTCTTCGGGGTCGAGGCAATCAAGGTGGACGTAGAGCGCCACCATCTGGCAATGCCTGA 6411 0.4371 MPLFISDEEFSRCSGDTATVAAKADAFIRGLLHDLDTVRAKADAADINAEQNCSLIEQKYLSLAADFSKFESLVSELQSSLDQRQRELAETQSQNHQFHLQLVEKDREIESLRTEVGELHKSKRQLIELNEQKDLEISEKNTTIKSYLDKIVNTCDDAFFVVFDGVVLLKVRLTENAAHKEACLSEVEAELGRLRSACTRFQQEKDILERQNAWLNDELTAKVNSFFELRRKHTELDADKSSMLTDVERQFSECSKSLLWNKDRVRELEVRLKSTQEALISAKDAAAANEERLSAELSTVNKLNELYKESSEEWSRKAADLEGVIKAMELHLKQSDDVYKEKLEKELCARKQVEKEAADLKEKLEECEAEIQTRKKTNESNNLQLTSFTADPWFASIEVDNMVDENSVIVPKIPVGVSGTALAASLMRDGWSMNILTVSLYFLKLAKMYAKYQEAVDALRHEQLGRKESEAILQRVLYELEEKAEAIVDERAEHEKMAHAYSLMNQKLQNSLTENTYLEKTIQELKADLKRSERDYNLAQNEINDLQKQVTVLLKECQDIQLRGGSIEYDIVDVTANITSTTTTETEAENVISEHLLTFKDINGLVEQNVQLRSLVRSLSGQIENQEVEFKEKLEMELTKHTEAASSKVESVMQRAEEQGRMIESLHTSVAMYKRLYEEEHSNKLPHSHSSEAVAAVAEVGRNDLKASIESSQEDAKKSLEKVAERVKYLEDDLAKSRSEIIVLRSERDKMALEANFARERLESFMKELEHQKAEVNGILARNLEFSQLIVDYQQKLRESSESLSAAEERCRKHSMELSVLKHEKEILSNAEKRASDEVQSLSERVQRLQASLGTVQSAEEIREEARASQRVKHEEYVKKLEKEWAEAKKELQEERENVRRLSLDHDQTLKNSLRQVEDMSKELTNALRAVTSADSRAAAAEANLCSLQRKMGSTDDDKVVEMDGVSRPSTMSSDELSPSAASLIDTVSTPLVLPMPPMKFKATSYLVRRRFMMVVAELQAAKEEIEKLKEETHANKAHMLQYKGIAEVNEDALKQIEVAHENYKIESDKAKKALEAELRSLKEKVSELENECSLKSEAVASATAGKEEALASAFAEITNLKEEILSKSSQISAMEIQISAFKEHLDKEHQRWHTAQKNYERQVILQSETIQELTKTSEALALLQEEASKLRKSTDAQKIENSELKAKWEEEKVALEKARSDAEKKYDEINEQNKILHSQLDALHIRWAEKERSYAGVSSGSSSADLFGDASLQNVINYLRRSKEIAETEVSLLKQEKLRLQSRLESALKAAESAHAKLEAERTKSKSFLFTEEEFKALQLQVQEMNLLRESNMQLREENKHNFEEWQKSCELAQKARAEIENLENLLRQNEIELEGRKNEIEALKMEKDHLNHKLMERSKNVDVEDYDRVKKLVRDLQDKLRDKDVKIEEFAKIVSEKQVYVSRLEQDLSNCRLEFTEKEKRVNDILHVEASLKLEAEKHRKLLVQFKKRIDVLSREKEELGKDNQQLARQLDEIKQAKRPTSDTTGERAMKEEKDTRIQILEKHLERLRDELKKEKEDNRVERSRRLKTEKAIKDSYNNVEQEKTKFINELERHKEALKQLSNEVEKLKIDLSNLPEGLNAAQLFSGSSVDDFVAPYVSAVENFEKESQSMFSELGGRGNLGDTSTVPDSSATATGSLVHAQPPGSTSLLVPGESSLPPKSMGDSERRLALPRAGVDARKAGRRLVRPRLVKPGEPQGDAEMSDAEGPGGKPGPSGDTESQSSAALSFQPLARKRVAPTPSSELHEESATLEKSSDVVAPVLKKSKGSESPEVSAEEQPAATPEFTGSHPINEESFDGGELPQGQNEEAGEAQNEDGEFAVDRDEESKDPQHMDDTSQEELHGDRTSILEENLDQPAETKVVTDDVQRDHREPDNQQSTLAPGSEREEGEMFLDSGDLEGGSDLSNIAENQDSREGQPEPAASPEPSPARADDEALEAGEISPERSMDDKIDEGDIVEESVDVTDPTVVESDQVADPAPVAGESSLTGSAAETSSSKTNLPVPKQGTNSETEDTKQQQASPPSMSTTINLSERARQRAQLREAGRGRGRASPRGRVLRGRGNQGGRRAPPSGNA 2136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0523 2136 Coils Coil 1206 1240 - -
Lal20g0523 2136 Coils Coil 184 218 - -
Lal20g0523 2136 MobiDBLite consensus disorder prediction 1992 2014 - -
Lal20g0523 2136 Coils Coil 1498 1539 - -
Lal20g0523 2136 Coils Coil 1054 1099 - -
Lal20g0523 2136 Coils Coil 1174 1194 - -
Lal20g0523 2136 PANTHER NUCLEOPROTEIN TPR-RELATED 1 2123 - -
Lal20g0523 2136 MobiDBLite consensus disorder prediction 2097 2111 - -
Lal20g0523 2136 Coils Coil 515 563 - -
Lal20g0523 2136 MobiDBLite consensus disorder prediction 1728 1752 - -
Lal20g0523 2136 Coils Coil 343 377 - -
Lal20g0523 2136 Pfam TPR/MLP1/MLP2-like protein 1117 1244 IPR012929 GO:0006606
Lal20g0523 2136 Coils Coil 1553 1587 - -
Lal20g0523 2136 Coils Coil 1339 1359 - -
Lal20g0523 2136 Coils Coil 265 285 - -
Lal20g0523 2136 Coils Coil 1599 1633 - -
Lal20g0523 2136 Coils Coil 790 852 - -
Lal20g0523 2136 Coils Coil 1012 1039 - -
Lal20g0523 2136 Coils Coil 1284 1322 - -
Lal20g0523 2136 Coils Coil 1374 1415 - -
Lal20g0523 2136 MobiDBLite consensus disorder prediction 1673 1716 - -
Lal20g0523 2136 Coils Coil 702 740 - -
Lal20g0523 2136 MobiDBLite consensus disorder prediction 2048 2096 - -
Lal20g0523 2136 Coils Coil 477 497 - -
Lal20g0523 2136 MobiDBLite consensus disorder prediction 1883 1937 - -
Lal20g0523 2136 MobiDBLite consensus disorder prediction 1673 2136 - -
Lal20g0523 2136 Coils Coil 871 930 - -
Lal20g0523 2136 Coils Coil 755 775 - -
Lal20g0523 2136 PANTHER NUCLEOPROTEIN TPR 1 2123 - -
Lal20g0523 2136 Coils Coil 1463 1483 - -
Lal20g0523 2136 Coils Coil 74 94 - -
Lal20g0523 2136 MobiDBLite consensus disorder prediction 1525 1556 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0523 Lal-Chr20 4502994 4541805 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0523 K09291 - gmx:100811882 2828.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0523 20 4502994 4541805 Lal20g0523 20 4502994 4541805 ECH
Lal20g0523 20 4502994 4541805 Lal1g1523 1 17383219 17409794 LSH