Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0520 ATGAAGTTCCACTACTTTTCTTTGTTCCTTGTTTTTGTTATCTTGAACTTAAGCACCACTTTTGGCTTGTCTGCTGCAAAATCCTTATTACCCTCTGAAGCATTGTTATCTTCTGATCACTATCATGGAACATGCCCAAATGCTGAAGCCATTATTTCACAAACTGTTTCTGTTTGGGTTAAGAAAGATCCTACCTTGGCACCTTCCATTATACGCCTTCATTTTCATGATTGTTTGTTGGACTTCTATTCAAATAAGGGATGTGATGCATCAATTTTGCTTAACAATCCAAGGGGTGAGAGGAATGCAGTGAATAGCAAAACACTGAGAGGTTTCCAAATGATTGATGATATAAAGTCTCAACTAGAAAAGAGTTGTCCAAGAATGGTTTCTTGTGCTGATATTCTCACTGCTGCTGCAAGGGATGCAACAATCTTAGCTGGAGGGCCATTCTGGGAAGTCACATTCGGTCGAAAAGACGGAAAGATTTCCTTAGCCAGTGAGGCCAATTTGGTTCCACATGGCCATGAAAACATTACAGCACTTGTCCAATTTTTTGAAGCAAGAGGACTAGACATTCTTGACTTGGTTGCTCTCTCAGGTTCACACACAATTGGAAGGAGCACTTGCTATTCTTTTATAGATAGGCTCTATAACTTCAATGGGACTAGAAAACCTGACCCTTCACTCAGCTACTCTTTCTTGAATCTGTTGAGGAAAAGGTGTCAAAGGGTGTTGGATTTGGTGTACCTTGATGTTATAACCCCAAGGACTTTTGACTCAACATATTACACAAACCTTGTTAAGAAACTTGGGTTGTTGTCAACAGATCAATCACTGTTTTCAGATGCAAGAACTTCTCCTTTTGTGCAAGCATTTGCAACACAACCTTTCCTTTTCACTAGCCAGTTTGCTGTGTCAATGGTGAAGCTTGGAAATGTTCAAGTTCTAACAAGGCCAAATGAAGGTGAAATCAGAGTCAATTGCAACTATGTCAATACTATCTAA 1008 0.3958 MKFHYFSLFLVFVILNLSTTFGLSAAKSLLPSEALLSSDHYHGTCPNAEAIISQTVSVWVKKDPTLAPSIIRLHFHDCLLDFYSNKGCDASILLNNPRGERNAVNSKTLRGFQMIDDIKSQLEKSCPRMVSCADILTAAARDATILAGGPFWEVTFGRKDGKISLASEANLVPHGHENITALVQFFEARGLDILDLVALSGSHTIGRSTCYSFIDRLYNFNGTRKPDPSLSYSFLNLLRKRCQRVLDLVYLDVITPRTFDSTYYTNLVKKLGLLSTDQSLFSDARTSPFVQAFATQPFLFTSQFAVSMVKLGNVQVLTRPNEGEIRVNCNYVNTI 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0520 335 Pfam Peroxidase 53 295 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal20g0520 335 Gene3D - 39 333 - -
Lal20g0520 335 ProSitePatterns Peroxidases proximal heme-ligand signature. 195 205 IPR019793 -
Lal20g0520 335 PANTHER PEROXIDASE 21 332 - -
Lal20g0520 335 SUPERFAMILY Heme-dependent peroxidases 37 333 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lal20g0520 335 PANTHER PEROXIDASE 25-RELATED 21 332 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal20g0520 335 Gene3D Peroxidase, domain 2 173 311 - -
Lal20g0520 335 ProSitePatterns Peroxidases active site signature. 67 78 IPR019794 GO:0004601
Lal20g0520 335 PRINTS Plant peroxidase signature 45 64 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal20g0520 335 PRINTS Plant peroxidase signature 69 89 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal20g0520 335 PRINTS Plant peroxidase signature 110 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal20g0520 335 PRINTS Plant peroxidase signature 129 139 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal20g0520 335 PRINTS Plant peroxidase signature 148 163 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal20g0520 335 PRINTS Plant peroxidase signature 194 206 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal20g0520 335 PRINTS Plant peroxidase signature 250 265 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal20g0520 335 PRINTS Plant peroxidase signature 266 283 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal20g0520 335 PRINTS Plant peroxidase signature 306 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal20g0520 335 ProSiteProfiles Plant heme peroxidase family profile. 35 333 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal20g0520 335 CDD secretory_peroxidase 36 332 IPR033905 GO:0004601|GO:0042744
Lal20g0520 335 PRINTS Haem peroxidase superfamily signature 67 81 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal20g0520 335 PRINTS Haem peroxidase superfamily signature 130 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal20g0520 335 PRINTS Haem peroxidase superfamily signature 148 160 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal20g0520 335 PRINTS Haem peroxidase superfamily signature 195 210 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal20g0520 335 PRINTS Haem peroxidase superfamily signature 252 267 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0520 Lal-Chr20 4458493 4464756 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0520 27 334 Peroxidase AT1G30870 49.677 9.90e-105 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0520 K00430 - gmx:100792775 526.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0520 20 4458493 4464756 Lal20g0520 20 4458493 4464756 ECH
Lal20g0520 20 4458493 4464756 Lal11g1558 11 18656744 18658017 LSH