Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0518 ATGGCAAGAAAAGCAGTATTGATAGGATGCAACTACCCAGGAACAAAGGCTGAGCTAAAAGGATGCATCAATGATGTGTGGAGAATGTACAATTGCCTCATCAATCGATACAATTTCTCACAAGAAGACATTACAGTCCTCATTGATACTGACCCTTCTTACACCCAACCTACCGGCAAGAACATCCGATTGGCGCTGTCTAGGTTGATTCGATTCGCGAAGTCGGGCGATGTTTTGTTCGTGCATTACAGCGGCCATGGCACGCGCCTCCCGGCTGAGACGGAGGATGATGATACTGGCTATGATGAATGCATTGTTCCAACTGATATGAATCTCATCACTGATGATGACTTCAAAGAATTTATGAACAAGGTTCCTAGAGGATGTAAGATCACAATGGTATCAGATTCTTGTCACAGTGGTGGTTTGATTCAATCTGCTAAGGAGCAAATAGGAGAGAGCACAAGGGAACTAGCTCAAAATTCAGGCACTGGCTTTGAATCCAGAACTTTTATTCATAGATCCATGGAAGATGCTGTTTTTGAAGAAAGACATGCTTCAGTTCCTCATCAATTCCATGGCTATGTGAAGAATCGTTCTCTCCCTCTTCACATTCTGATTGACATACTCAAGCAAAAAACTGGAGACAATGATATAGAAGTTGGGAAACTTAGGTCAACACTTTTCAATTTCTTTGGTGATGATGCTAGCCCTAAAGTAAAACATTTCATGAAGTTTATATTGAACAAACTTGAACATTATGTAGATAATGAAAATGGAGGACACAGTGGGATTTTAGGGTTAGTGGGAAATCTTGCCCAAGAATTTCTCAAACACAAACTAGAAGAAAATGATGATGAGGGTGAGGGTGAGATCCATATTAGAATGAAGGAAGAAGTGTATGATGGATCAAGTAAGGGTAGAACTATTGATCATGGAATCCTTTTAAGTGGTTGCCAAACAAATCAAACTTCTGCAGATGCAACCCCCTTTGGAAATTCTGATTATGCTTATGGTGCATTTAGCAATGCCATTCAAGCTATAATTGAGGAAACTGATGGTGAAGTTACAAACTGGGAGCTTGTTGTGAAGGCTAGGAAGAAGCTTAAGAGTGAAGGTTTCTCACAAAAACCTGGACTCTATTGTGGTGACCACTATGCTGATACTCCTTTTGTGTGCTGA 1182 0.4061 MARKAVLIGCNYPGTKAELKGCINDVWRMYNCLINRYNFSQEDITVLIDTDPSYTQPTGKNIRLALSRLIRFAKSGDVLFVHYSGHGTRLPAETEDDDTGYDECIVPTDMNLITDDDFKEFMNKVPRGCKITMVSDSCHSGGLIQSAKEQIGESTRELAQNSGTGFESRTFIHRSMEDAVFEERHASVPHQFHGYVKNRSLPLHILIDILKQKTGDNDIEVGKLRSTLFNFFGDDASPKVKHFMKFILNKLEHYVDNENGGHSGILGLVGNLAQEFLKHKLEENDDEGEGEIHIRMKEEVYDGSSKGRTIDHGILLSGCQTNQTSADATPFGNSDYAYGAFSNAIQAIIEETDGEVTNWELVVKARKKLKSEGFSQKPGLYCGDHYADTPFVC 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0518 393 PANTHER METACASPASE-5 1 393 - -
Lal20g0518 393 SUPERFAMILY Caspase-like 3 133 IPR029030 -
Lal20g0518 393 Pfam Caspase domain 3 383 - -
Lal20g0518 393 Gene3D - 1 179 - -
Lal20g0518 393 Gene3D - 277 391 - -
Lal20g0518 393 PANTHER METACASPASE-4 1 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0518 Lal-Chr20 4441181 4443985 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0518 - - cam:101509553 546.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0518 20 4441181 4443985 Lal20g0518 20 4441181 4443985 ECH