Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0509 ATGATGATCTTACCACCTCTTAAATTCTGCTTTTATGAAAAGGTGCACAAGCATATGAAGTCCCCTATTTATGTTTACTATCAGCTGGACAACTTCTACCAGAACCATCGCCGGTATGTTAAAAGCCGAAGTGATGAGCAATTGAGGGATCGCAATAAAGAGAGCTCAACAAGTACTTGTAAGCCTGAAGATATTGCAAATCATAAGCCAATTGTACCTTGTGGTCTTATAGCTTGGAGTTTATTCAATGATACATACATCTTCTCCCGCAACAACAAGAACTTGACATTGAACAAGAAAGGCATCTCCTGGAAGAGTGATAGGGAGCACAAATTTGGAAAAGATGTTTTCCCTAAAAACTTTCAGAATGATTCTATTATAGGTGGTGCACATCTCATTGAATCCATACCATTGAGTGACCAAGAGGATCTTATTGTATGGATGCGAACCGCTGCTTTGCCAACATTTAGGAAGTTGTATGGAAAAATAGAGGTGGATCTGAATGAAGGTGATGACATAAATGTAAGACTGGAAAATAACTACAACACATACAGTTTTAACGGCAAGAAAACGCTTGTGTTGTCAACTACTAGCTGGCTTGGTGGGAAGAATGACTTCCTTGGCATTGCGTATCTCACCATTGGAGGATTGTGCTTCGTTTTGGCTCTGGCTTTTACCATTGTATATTTTGTCAAGCCAAGGCAACTAGGAGATCCATCATATTTGTCATGGAATAGGAATCCAGGTGTGCACTGA 756 0.3981 MMILPPLKFCFYEKVHKHMKSPIYVYYQLDNFYQNHRRYVKSRSDEQLRDRNKESSTSTCKPEDIANHKPIVPCGLIAWSLFNDTYIFSRNNKNLTLNKKGISWKSDREHKFGKDVFPKNFQNDSIIGGAHLIESIPLSDQEDLIVWMRTAALPTFRKLYGKIEVDLNEGDDINVRLENNYNTYSFNGKKTLVLSTTSWLGGKNDFLGIAYLTIGGLCFVLALAFTIVYFVKPRQLGDPSYLSWNRNPGVH 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0509 251 MobiDBLite consensus disorder prediction 43 58 - -
Lal20g0509 251 PIRSF Lem3/Cdc50 8 247 IPR005045 GO:0016020
Lal20g0509 251 Pfam LEM3 (ligand-effect modulator 3) family / CDC50 family 14 235 IPR005045 GO:0016020
Lal20g0509 251 PANTHER CDC50/LEM3 FAMILY-RELATED 14 249 - -
Lal20g0509 251 PANTHER CELL CYCLE CONTROL PROTEIN 50 14 249 IPR005045 GO:0016020
Lal20g0509 251 MobiDBLite consensus disorder prediction 43 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0509 Lal-Chr20 4335568 4340974 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0509 - - gmx:100806200 436.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0509 20 4335568 4340974 Lal20g0509 20 4335568 4340974 ECH
Lal20g0509 20 4335568 4340974 Lal11g1548 11 18580893 18585343 LSH
Lal20g0509 20 4335568 4340974 Lal2g0692 2 4223595 4228133 PCT
Lal20g0509 20 4335568 4340974 Lal9g0605 9 4084033 4089418 PCT
Lal2g0692 2 4223595 4228133 Lal20g0509 20 4335568 4340974 PCT
Lal9g0605 9 4084033 4089418 Lal20g0509 20 4335568 4340974 PCT