Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0492 ATGGAAGTATCAAGATCCCAAAGAACACTCCCATTCAACAGCATGGAATCCGGAAATGAAGAATTCCAGCCTGGATCACAGTCAGTAATGCAAGACCATCTGGATGTCATGCATGCTAGTCGAAGACCGCCTGACCTCAGTACATTGGAAGTTAAACCTGTACTTAATTACTCCATGAACACAGGTGAGGAATTTGCACTCGAATTTTTGAGAGATAGGGTGAATCTCAGGAAGCCTGTATTTTCAAATGCCAGTGATTCCAATTATACAACGGGTTATATGGATCTTAAAGGTATTTTAGGCATTAGTCATCAAGGATCTGAAAGTGGATCAGACATTTCTATGCTCTCAATGGTTGATAAATATCCAAAAGAGTACGATAGAATGAACACATCATTACATGGAGACAGAAGCAATTATGGGTCAATTCGACCAATACCAAAATCTTCATTGAATCTGGACAATAGACAATATGTGCATGGGTATGGTTCTTCTCGAGGTTATGATAGCCTGTCAACAATGATGAAGTTTCTTTGCAGCTTTGGTGGTAGAATATTACCACGTCCCTGTGATGGAAAGCTAAGGTATGTTGGAGGCCAAACACGTATTCTTCGTATAAGAAAGGACATATCTTGGCAGGAGCTCTTGCAGAAAGCATTGTTGATCTATAATCAGGTTCATGTAATCAAGTATCAGCTTCCTGGAGAAGATCTTGATGCTTTGGTATCTGTGTCATCGGATGAGGATTTGCAGAATATGATGGAGGAATGCAATCATCTAGAAGATAGAGAAGGATCACAAAAGCTTCGAATGTTTTTCTTCTCAATGAGTGATTTGGAGGATGCTCAGTTTGGTCTTGGTAGCATGGGTGATGATTCTGAAATCCAGTATTTTGTTGCTGTTAATGGCATGGACTTGGGGTCAAGGAAAAACTCAACCATGTTCGGCGTTGGTTTTTCAGAAAATGATATACATGAGTTAGATGGGCAAAATATTGAGAGAGAGACTAGTAGAGTTGCTCTGGAATCTATAGGTGTTAGCAATGCTCCCTTGACTAGCAGATTCGACTCATTATTGAATACCCAGTCTTCACAACCGGTGCTACCAACTTCCTCAAATTCTTACGAAACCTATCCACTATTTTATGGTGACCAAATGATGCGCCATGAGGAACCTGGTGGTCAATATCTTATGAATCATGGCATTAACCCTTCTCACAGACCTGTTTTTGGAGAGATTCCTTATACCACGGCTCCTCATATACTAATTAATCAACAAGGGATTTTAAATGAGGGCCATCGAGGTAGTGGTTTACAAATGCAAAATTCAGAAATACCAGCAATGCTGGCTAAAAAGATGGGGGATGGTTCAATTCAACAAGGAGGTGACCCTGGGAAAGTTGTATCCTTGGAAACTCCTGCGCAACTGTTTGATGGTTACTATAAAAATATTTTCCCTGAAGTATCAACAAAAAAGGAATGGCTTCAGGATTATGAAGAGGTTTCTTCGGCATCTAGCAATGCTTTTGGTCCTGCTTATGTTGATTCACAATCTAATGCAGTTGACTTGAGTTCTCTTCACCCTCCCCCCCTTCCTAAAAGAGTTTACTATTCAGAAAGAATTCCCAGGGAGCAAGTAGAGTTTCTGAATCGATCCTCTAAGTCAGATGATGCACACAGTTTGCAAATTCATGTTTCAGATTTACTTTCTGATGTCAACCCGTCGGATTCAGTTACAGAATCTGGTGGCAACTTGCAAGATGGAAATATGTCTAATCTAGCCGAGGAATCAAGCATCACAGCCAAGCCCTTGCATGCAGATGGCCGTGCCATTGACAACGAGGCTGTCGAAAATCAGATACTCCCACGGTTGCCTGATTCAAGCAATCAGATGAAGTCAAAGCCTACTGAGCATTTGAATCCTGATTTGAAGCAGGTATTATCAAACAATGGAAGCAGTAAAGATGTCATAAATAAGGATAATGTTGTTAGTCTGGAAACTGAAATTTATAGTAAAGGTAATCATAATAAACCACTGCTTGATGAGTCGAAAGACTGCAAATCAGAGTATCCTGCTTCGCACCAAGTTACCTCTGTTAAGCACCATGACGATCCAGCATCCAATCTTCCAGAGATTGATTGGGGTGATGCCGCTGTATTGGAATCTAATAATGATTATAGGGTGCAAGAACTACCTGTTACTTTAAATGGAAACACAACTATGAAAGACGAATCTCAAGATTTTCCTTCAAATGTTGTTTCCAAACAAGCACAAGGTGACATTCTTATTGATATTAATGATCGGTTTCCGCGGCAATTGCTTAGTGATATATTCTCCAAAGCAATACTTGAAGAAGATCCCTCTAGTCTGCACCCATTAACCTCGGATGGACTAGGCCTAAGTGTAAACATGGAAAATCATGAACCTAAACGATGGTCATATTTTCAAAAATTGGCACAAGGACTCGATAATGTGTCTCTTATTGACCAGGATCATCCTGGTTTATCACCCACACTAAGAGAAGTAGGAGATAATAGAACTGAACATGTCACACCTCTAACAACTGATGAAGAAAAACAGAAAGACTTACATGGAAGGAATGGGACAGAATCCAATGCTCTGAAGTCAAACTATGATCATTCTGAGGTGAAGGACACTGAAAGTATGCAGTTCAGTGCTATGATAGAAAATCTAAGAGCACATGAGTCAGAATATGAGGATGGGAATTTTGAAACAAGAAATAATGGTCTACCTCCGGTTGATCCTTCTTTAGGAGAATTTGATATGAGTACCTTGCAGGTCATTATGAATGAAGATCTTGAAGAGCTGAGGGAACTGGGTTCTGGCACCTTTGGGACTGTGTATCATGGAAAATGGCGAGGAACAGATGTTGCTATTAAAAGAATAAAGAAAAGCTGCTTCACTGGTCGATCATCTGAGCAAGAGAGATTGACTCTAGAATTCTGGCGGGAAGCAGACATTCTTTCCAAGCTTCATCATCCAAATGTGGTGGCATTTTATGGTGTGGTGCAGAATGGACCAGGAGGAACAATGGCCACTGTTACAGAATTCATGGTTGATGGTTCTCTTAGGCACGTTTTACTTCGCAAGGATAGGTATCTTGATCGTCGCAAGAGATTGATAATTGCAATGGACGCAGCTTTTGGAATGGAATATTTGCACTCAAAAAATATTGTGCATTTTGACTTAAAATGCGACAATTTGCTCGTGAACTTAAAAGATCCTTTACGGCCAATATGCAAGACTAACGAATTTGCTTCCCAGGTTGGTGATTTTGGCTTGTCAAAAATTAAACGGAATACCTTGGTTTCTGGTGGTGTGCGGGGGACTTTGCCTTGGATGGCACCGGAGCTGCTAAATGGTAGCAGCAACAAGGTCTCAGAGAAGGTTGATGTGTTCTCTTTTGGCATTGTATTGTGGGAGATTCTCACTGATGAGGAGCCATATGCCAATATGCACTATGGTGCAATCATAGGTGGCATTGTCAATAACACACTAAGACCAACAATCCCAAGTTATTGTGATCAGGACTGGAGAACACTAATGGAGGAATGTTGGGCACCCAATCCTGCAGTTAGGCCTTCCTTTACCGAGATCGCAAGTCGATTGCGTGTAATGTCCGCGGTAGCTCTACCAACCAAAACACAGGGCCACAAGGCATCTAAATGA 3690 0.41 MEVSRSQRTLPFNSMESGNEEFQPGSQSVMQDHLDVMHASRRPPDLSTLEVKPVLNYSMNTGEEFALEFLRDRVNLRKPVFSNASDSNYTTGYMDLKGILGISHQGSESGSDISMLSMVDKYPKEYDRMNTSLHGDRSNYGSIRPIPKSSLNLDNRQYVHGYGSSRGYDSLSTMMKFLCSFGGRILPRPCDGKLRYVGGQTRILRIRKDISWQELLQKALLIYNQVHVIKYQLPGEDLDALVSVSSDEDLQNMMEECNHLEDREGSQKLRMFFFSMSDLEDAQFGLGSMGDDSEIQYFVAVNGMDLGSRKNSTMFGVGFSENDIHELDGQNIERETSRVALESIGVSNAPLTSRFDSLLNTQSSQPVLPTSSNSYETYPLFYGDQMMRHEEPGGQYLMNHGINPSHRPVFGEIPYTTAPHILINQQGILNEGHRGSGLQMQNSEIPAMLAKKMGDGSIQQGGDPGKVVSLETPAQLFDGYYKNIFPEVSTKKEWLQDYEEVSSASSNAFGPAYVDSQSNAVDLSSLHPPPLPKRVYYSERIPREQVEFLNRSSKSDDAHSLQIHVSDLLSDVNPSDSVTESGGNLQDGNMSNLAEESSITAKPLHADGRAIDNEAVENQILPRLPDSSNQMKSKPTEHLNPDLKQVLSNNGSSKDVINKDNVVSLETEIYSKGNHNKPLLDESKDCKSEYPASHQVTSVKHHDDPASNLPEIDWGDAAVLESNNDYRVQELPVTLNGNTTMKDESQDFPSNVVSKQAQGDILIDINDRFPRQLLSDIFSKAILEEDPSSLHPLTSDGLGLSVNMENHEPKRWSYFQKLAQGLDNVSLIDQDHPGLSPTLREVGDNRTEHVTPLTTDEEKQKDLHGRNGTESNALKSNYDHSEVKDTESMQFSAMIENLRAHESEYEDGNFETRNNGLPPVDPSLGEFDMSTLQVIMNEDLEELRELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREADILSKLHHPNVVAFYGVVQNGPGGTMATVTEFMVDGSLRHVLLRKDRYLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPLRPICKTNEFASQVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTDEEPYANMHYGAIIGGIVNNTLRPTIPSYCDQDWRTLMEECWAPNPAVRPSFTEIASRLRVMSAVALPTKTQGHKASK 1229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0492 1229 PRINTS Tyrosine kinase catalytic domain signature 1022 1035 IPR001245 GO:0004672|GO:0006468
Lal20g0492 1229 PRINTS Tyrosine kinase catalytic domain signature 1059 1077 IPR001245 GO:0004672|GO:0006468
Lal20g0492 1229 PRINTS Tyrosine kinase catalytic domain signature 1181 1203 IPR001245 GO:0004672|GO:0006468
Lal20g0492 1229 MobiDBLite consensus disorder prediction 618 655 - -
Lal20g0492 1229 SUPERFAMILY Protein kinase-like (PK-like) 930 1209 IPR011009 -
Lal20g0492 1229 ProSiteProfiles Protein kinase domain profile. 940 1212 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal20g0492 1229 MobiDBLite consensus disorder prediction 1 27 - -
Lal20g0492 1229 Gene3D Transferase(Phosphotransferase) domain 1 1028 1228 - -
Lal20g0492 1229 MobiDBLite consensus disorder prediction 571 590 - -
Lal20g0492 1229 Gene3D Phosphorylase Kinase; domain 1 933 1027 - -
Lal20g0492 1229 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1065 1077 IPR008271 GO:0004672|GO:0006468
Lal20g0492 1229 CDD STKc_MAP3K-like 946 1210 - -
Lal20g0492 1229 MobiDBLite consensus disorder prediction 834 882 - -
Lal20g0492 1229 SMART serkin_6 940 1216 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal20g0492 1229 ProSitePatterns Protein kinases ATP-binding region signature. 946 971 IPR017441 GO:0005524
Lal20g0492 1229 PANTHER SERINE-THREONINE PROTEIN KINASE 86 1229 - -
Lal20g0492 1229 MobiDBLite consensus disorder prediction 842 868 - -
Lal20g0492 1229 CDD PB1_UP2 178 274 - -
Lal20g0492 1229 MobiDBLite consensus disorder prediction 622 655 - -
Lal20g0492 1229 SUPERFAMILY CAD & PB1 domains 191 279 - -
Lal20g0492 1229 Pfam PB1 domain 191 272 IPR000270 GO:0005515
Lal20g0492 1229 SMART PB1_new 189 274 IPR000270 GO:0005515
Lal20g0492 1229 Pfam Protein tyrosine and serine/threonine kinase 941 1210 IPR001245 GO:0004672|GO:0006468
Lal20g0492 1229 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 86 1229 - -
Lal20g0492 1229 Gene3D - 193 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0492 Lal-Chr20 4185175 4192430 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0492 27 619 MAP Kinase Kinase Kinase AT1G16270 35.618 5.41e-81 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Lal20g0492 PK_Tyr_Ser-Thr 8.3e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0492 - - gmx:100799639 1850.48