Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0472 ATGAAGCAGTTGATCCGCCGTCTCTCCCGTGTTGCTGACTCTTCTCATTATACTCTTCTCCGATCCGACTACCCGCTCCGGCGAAACTTCCGGCGACCGGACAAGATTCGTCGCTCTTCAACCGTTGTGCCGGAGGGACATGTGCCGATCTACGTTGGCGATGAGATGGAGCGGTTCGTGGTGAACGCTGAGCTCCTTAACCATCCGATCTTCGTGAAGCTTCTGAACCTGTCGGCGCAAGAATATGGTTACGAACAGAAAGGAGTGCTACGGTTGCCGTGCCACGTCATTGTCTTCGAGCGCGTGCTCGACACGCTTCGACGAGGACAAGACACTCGAGAAATTCAAGAACTCCTCAGTTTCTCGTCGGAAGAGTTCAGAGAAATCGCGATTGCGGTAACGGTTGCGGTTATTGTGATTGTGGTCATTGTGACCGTTGCGATGCGGATTGCGGCTATTGCGAAACAAAAAAACAGAAAAAAAGGTTAG 489 0.5194 MKQLIRRLSRVADSSHYTLLRSDYPLRRNFRRPDKIRRSSTVVPEGHVPIYVGDEMERFVVNAELLNHPIFVKLLNLSAQEYGYEQKGVLRLPCHVIVFERVLDTLRRGQDTREIQELLSFSSEEFREIAIAVTVAVIVIVVIVTVAMRIAAIAKQKNRKKG 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0472 162 Pfam Auxin responsive protein 8 105 IPR003676 GO:0009733
Lal20g0472 162 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 2 125 IPR003676 GO:0009733
Lal20g0472 162 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR72 2 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0472 Lal-Chr20 3889383 3890369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0472 41 106 Calmodulin-binding Proteins AT2G24400 42.424 1.74e-14 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0472 K14488 - lang:109333785 179.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0472 20 3889383 3890369 Lal20g0472 20 3889383 3890369 ECH