Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0464 ATGCCCCTTTCTCCTTCTTCCATGGCTTCCACCACTCACTTCTATCCAAACTACACATTCACTAATGATTTTTCTGAGTTTCCTACCCAAGGTTTAATAGCTTCACTTAATGGTAATAGGGTTGTTATGGATAATAATAATACCATGTGGGGAAGTCAAGATAGTAGTTTCATTCCTAATCTTTTTGATAATAATGGTGCACTTGATCATGTTGTGCCACATGATTTTGATACCATGGCTTCTTCTTCTTGCTGGATGCAAACTTTTCCTGATTTTCAACTAGGGGGTTTTTCAGAATTGGCCAATACAGCTAATAATGTTATTCCAGATTGTAAAATGAGCTTCTATGATGGTAATAATGGCATTACAGGGTTTCAGAATTTGGGAAGTAGATATCAGCAACCTCATATTGGTGAGTTTGTGGAAGAATATTGTGGTGGATTTGTGGAGGATATTAAGCCACCTTCTTATCCTAATACTGTCAAAGAAAACTGGGGTTTTCAAGGTAATCAATTGCCAGTAGTTGATGAGCCTAACATAAAGGTTGGAAGGTACTCAGAAGAAGAAAGGAAAGAAAGAATTCTCAGATATTTGAAGAAAAGAAATCAAAGAAACTTCAACAAAACCATCAAGTATGCATGTAGGAAAACCTTAGCTGACCGGAGAGTTAGAGTTAGGGGAAGGTTTGCTAGAAACAATGAGCTATGTGAGGAAGATGTGGAAACAAAAAGAGAGAATCATGATCAAAAGGAAGACTTTTATGGTGGTGATACAATTCAGTTCCAGATAAAGAATGATGATGAGGATTGGCTCCAAGAGGCTATGGCAAGTTTAGTCTATTTATCTCATTCTTCCCCAGAAGATATGTAG 870 0.3713 MPLSPSSMASTTHFYPNYTFTNDFSEFPTQGLIASLNGNRVVMDNNNTMWGSQDSSFIPNLFDNNGALDHVVPHDFDTMASSSCWMQTFPDFQLGGFSELANTANNVIPDCKMSFYDGNNGITGFQNLGSRYQQPHIGEFVEEYCGGFVEDIKPPSYPNTVKENWGFQGNQLPVVDEPNIKVGRYSEEERKERILRYLKKRNQRNFNKTIKYACRKTLADRRVRVRGRFARNNELCEEDVETKRENHDQKEDFYGGDTIQFQIKNDDEDWLQEAMASLVYLSHSSPEDM 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0464 289 Pfam CCT motif 190 232 IPR010402 GO:0005515
Lal20g0464 289 PANTHER ACTIVATOR OF SPOMIN::LUC2 8 284 - -
Lal20g0464 289 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 8 284 - -
Lal20g0464 289 ProSiteProfiles CCT domain profile. 190 232 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0464 Lal-Chr20 3786007 3788545 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0464 186 240 C2C2-CO-like Transcription Factor Family AT5G57660 47.273 2.93e-10 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lal20g0464 CCT 9.2e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0464 - - gmx:102660475 374.785