Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0463 ATGAAGGAGTGTGGTAGAAAACAAAGTGCAATGTCTCCATGTGCAGCATGCAAGCTTCTTAGAAGAAGATGTGCTAAGGATTGTGTATTTGCTCCTTACTTCCCTGCTGATGAGCCTTGTAAGTTTGGGAGTGTCCACAAAGTTTTCGGGGCTAGTAATGTCAACAAAATGTTACAGGAATTACCAGAACATCAAAGATGCGATGCGGTTAGTTCGATGGTATATGAAGCAAATGCAAGGGTGAGGGACCCTGTGTATGGATGTGTTGGAGCCATATCCTCTCTGCAGCAACAGGTTGATGTGCTTCAGACTCAATTGGCTCTGGCTCAAGCAGAAGTTGTGCACATGAGAGTGCGCCAATCAAATCAGCAGCACCAACAAGTGACTCATGCAGGAGCAAATTCATCATCAGAGAATTTGTACCAATCAAGTATGCTCCTATCTTCTCAGACCAAGTCCCTTTTTGCTATGGACATGGTTGTTGATCAAGCCAACATGGGACACTCCTTGTGGTCATGCTAG 522 0.4483 MKECGRKQSAMSPCAACKLLRRRCAKDCVFAPYFPADEPCKFGSVHKVFGASNVNKMLQELPEHQRCDAVSSMVYEANARVRDPVYGCVGAISSLQQQVDVLQTQLALAQAEVVHMRVRQSNQQHQQVTHAGANSSSENLYQSSMLLSSQTKSLFAMDMVVDQANMGHSLWSC 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0463 173 Coils Coil 92 112 - -
Lal20g0463 173 PANTHER LOB DOMAIN-CONTAINING PROTEIN 3 1 169 - -
Lal20g0463 173 ProSiteProfiles LOB domain profile. 12 113 IPR004883 -
Lal20g0463 173 Pfam Lateral organ boundaries (LOB) domain 13 110 IPR004883 -
Lal20g0463 173 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0463 Lal-Chr20 3768034 3771170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0463 1 173 AS2 family AT1G31320 69.143 1.78e-72 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lal20g0463 LOB 1.6e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0463 - - gmx:100803188 271.166