Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0461 ATGGGTTTTAATGAAGATTTCATGAAGGAAAATGAGTATGTAGATGATGATGTTCCACTTCCAGGGTTTCGGTTTCATCCTACAGATGAAGAACTTCTTAGTTTCTATCTCAGAAGAAAGCTTGATGATAAACCCATCAATATTGAACTCATCAAGGAGATTGATATCTACAAACATGATCCTTGGGATCTTCCAAAAGCCAATGGAAGTGAAGGAGAAAGAGAAGGGTACTTCTATTGCCAAAGAGGGAGAAAGTATAGGAACAGCATAAGGCCAAATAGGGTAACTGGTTCTGGTTTTTGGAAAGCAACTGGAATAGACAAACCAGTGTATTCACATGGAGGAGAAGGCAATGACTGCATTGGACTCAAGAAAACACTTGTTTATTACTGTGGTAGTGCTAGTAAAGGCACCAAAACTGATTGGATGATGCATGAATTTCGCATTGCCTCTAATAATGACTCCATCACAAAGCTTCCTAAGGCTAAGAATAATAATAATTATAATAATGCAGATATTGCCCAAGAAGCTGAGATTTGGACATTGTGTAGGATTTTCAAAAGAAATGTATCACAAAGAAAGCACATACCAGAAATGAGAACACATTCAGCTTCTAAGAATCATTGCAATATTGACATGAGAACAAGAAAGAGCAGTGTAGAGTCTAATCAAGAAGCATATATCAATTTTGGTGCAAGTCTAAGCCATTATCAGAATGGTGAACAAAAGCATGTTATTAACTATCCAAGGAATCAGTTTCATGTAGGTCAGTTAAGTTCTCCAGTAACACAAAAACCTCAACTAACTGCACCATTTTCTAACTTATGGATTAACCCTGTTGTGTCTAATGACATTTTTACATTTGAAAACTGGGATGAACTAGGATCTGTGGTGAAGTTTGGTGTTGATTCTAATAGCTTGTAA 924 0.3647 MGFNEDFMKENEYVDDDVPLPGFRFHPTDEELLSFYLRRKLDDKPINIELIKEIDIYKHDPWDLPKANGSEGEREGYFYCQRGRKYRNSIRPNRVTGSGFWKATGIDKPVYSHGGEGNDCIGLKKTLVYYCGSASKGTKTDWMMHEFRIASNNDSITKLPKAKNNNNYNNADIAQEAEIWTLCRIFKRNVSQRKHIPEMRTHSASKNHCNIDMRTRKSSVESNQEAYINFGASLSHYQNGEQKHVINYPRNQFHVGQLSSPVTQKPQLTAPFSNLWINPVVSNDIFTFENWDELGSVVKFGVDSNSL 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0461 307 SUPERFAMILY NAC domain 13 188 IPR036093 GO:0003677|GO:0006355
Lal20g0461 307 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 11 304 - -
Lal20g0461 307 Pfam No apical meristem (NAM) protein 21 149 IPR003441 GO:0003677|GO:0006355
Lal20g0461 307 ProSiteProfiles NAC domain profile. 19 188 IPR003441 GO:0003677|GO:0006355
Lal20g0461 307 PANTHER DOMAIN-CONTAINING PROTEIN, PUTATIVE-RELATED 11 304 - -
Lal20g0461 307 Gene3D NAC domain 28 192 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0461 Lal-Chr20 3748817 3751861 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0461 16 198 NAC Transcription Factor Family AT5G39820 58.421 1.02e-71 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal20g0461 NAM 4.9e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0461 - - lang:109334083 497.664