Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0450 ATGAAACCCACCAAAGACAAAGATAACAATCGCTGCATCACTTTGCATATTCAAACCCTTCATCACCGTCTTCTTCATGAATTAAACCTTGGCACCAGATATTTTGATGAGAAGACAAATAGATGGAAGTGGCAGTGTGCCAACATTGAAGTGCAGAAAAATGTACTTCGTTCAATTAATGCATTTCTTGATTCCATATCTGGTGATGCGCGTGCAGCTCGTCATACTATCATTAAGGAATCTGTTGCTGATGTTTTCGGAGCAGTATTGTGGATTCTTCAAAGCAAAAATGGGACCTTGTTAAGCATGGCATCGGATGTGGCACTGAAGTTAGTTAGTGTTTTGCCAAATTCAATGTTGCAATCTCATATATTGGATCTTGTATGTTGTTTGTCATCCTTGCTATCGTCACATCAGATAGAAGTTGCAATACCTTGTGCTACTGCTTTGAATTTGTTAATATCAAATTTGAGTGCTACAAGTGAAAAGGCAGTTATGGAAGCATTGAAAGAAACAGGGACTGTCATTTGTGTTGTTGAAAAGATAAAAGATTTTACAGAAGGTGTGAAGAAAATTGAATATTTTGAAGAAATGGTTTCACTTCTGAGCACGATACTGCAACGATGGCCTCCATCCAGGTTCCCTGTTTGGAATGATGCTAAATTGGTGAAAGCTTTAGCAAACATTCATACAAGGAATGATAATTCAACTAAAGTTGTTCTTTTAAAGTTTTACACATCTTTAGCTTTATGTGATTCTGTAGCAAGAAAACTTATAGATGGTGGACAAATATTTCTACAATTGGCTGTGCACGCAATGGGAAAATCAAACCCTCATATTGTTCGGGCAGAAGGGTTTAGGCTCACTCAATGCCTACTGACATCTGAAGTGGATTTGTCAAAAGCAATGGATTTGTGTGGTGAAGCTATTGTCGATGCCATAATATGTGGGATGAAGGAAACAGTGCTGAGTTCTAAAAAAAATGGGAATAACTACGGTTCTTTATTAGTGGAAGCGTGTCAGTTGGCTCTAATAACACGTTGGTCCGGTGATCATCATATTAGGTTTTGGAAACAAGGGATTGATAGAGTCCTCCTTAATCTTCTTGTGAAAACTATTCCAGACCAATCTACTGAACATGTCTTGTCATTGGAAAAACAAATATCCATGGCAAAGGAGGGATTAAAAGCCAATTACCATCTTGGTCTGAGGAGTCATCTGTGGGACATTCTTGGGTGGCTTGCAATTCATTGTGGAGAAACTTTCAACCCTTATACCCATGGAAGTGAGCTCCACATCAACTTACTAATCACATGTGCATGCTTGACTTTTGTGGATACAATTCAAAAATGGGGCCGAATATGTCAAACGGATGATGATAATTTTCAAAGTGAACCAGTATCAAGGGCTGTTCTAATGATGGTTTATTCTCCATGTAATTACATTTCCTCACACACTAGATTCTTATTGTCTGATTTGCTGAAGGAAAATGGCATTCCATACTTGAAAAACTTATTACATACTCTAGATTATACATCATCCTTAGCAAGCTATGGGTCATCTGATAAACTTCAACTTGCTATTATTTTGATCGGGTTAACTTGTCTTTCAAGTTTAACAGAGTGCCAAAGATGTATCCTAAAAAGTAAAGGGATAAAGGCAGTTGTTCTTATTGTGAAACGATGCTTGAGTGACGATATTCATGTAGAAAGGTCCAGCTTTGCTCCTCATCCGCATACAACATTCCATGGAAGGTCTTGCTGCCGTAATGATAAAGAATGGGAAGGTTCCAATGTTCTCTTGTTTTATGGATTATGGTACATAGCAGAATATGTTCATCAGTGTGGCCTTTCAGAAGAAAATTCTTCTAAGTTTACTAGAGATGTGACATACATTAAAGCTCATTTAGTTAGCAAACTTCAGAAGATCTGTAGTAGCGCCTCTTCCAGTCCTGGAGTGAGATGGTATGTTTCCTATATTCTAAGTTATTTTGGATGTTATGGTTTCCCAAATGAATTGGCTGAAAGGTTTGGGAAATGTCTTCATGAGGGAGAATATGCAGATTTGCGACTCATTGTAGCAAATGGGAATCCGGTGAGTGCTCATGGTGTTATTCTTGCTGTCCGATGCCCATCACTGCTGCCTCCTGAAGTCTTACCTGGTAGTAAGAGTTCTAAAGGGGTAAAATATAAGGTAGTTGGAGAGACCATGCGAGAAGTTCGCTTATCTGCTCATGTTGACTATGAGACATTGGCTTTGTTGTTGGAATATGTATACTTGGGATACTTGCACGCAGGAGAAGAAACAGTGAAGAAGCTGAAAATTCTTGCTAAGCGCTGCAATCTAAAGCCTCTCTTGCGAATGCTTTATAGACAATGCCCAAAGTGGGGCACACCTTTCCCCAGCTCTGATCTTTCTTCGTCTCTTGATTCTGCTGGAAGTTGTTTTTCGGATGTAATATTGGAAGCTAAACCAAATAAACTTGTAGAATGGACGTGCAGTATTTGTTCTCACTCGGTACCACATTTGCATGTGCACAAAGTTATATTGCAGTCTGGCTGTGATTATTTACAGGGTTTGTTTGGGTCAGGAATGCAGGAGAGTCATTCACAAGTCTTAAAGGTTGATATTAGCTGGGAAGCATTGATTAAACTAGTAAAATTGTTTTATTCCAATGAGCTGCCAAATCCTCCTTCTGGGTGCTTGTGGGATAATATGAATGATGAAGAAAAGCTATTCCATCTGCAACCATATTTGGAGCTTTGCTGGTTAGCTGATTACTGGATTTGTGAAAATATGCAGGAAGCATGCTGGAAAGTGATTATGTTTTGTCTTGATTCCACTAAGCAGCTTTCCATCAAAATAATCAAAATGGCTTATAATCTCTCTTTGTGGAAGTTGGTTGACATTGCAGCCAATCTCATTGCTCCATCATATAGTCAATTACGAGATTCAGGTGAACTTCAAGAATTTGATGATGTGATAGTTCATTTAATTTATTCTGCTTCTATTCGAAGACTTACCCAAGAAGGTGGAAATTGCTTTAGGTGA 3051 0.3858 MKPTKDKDNNRCITLHIQTLHHRLLHELNLGTRYFDEKTNRWKWQCANIEVQKNVLRSINAFLDSISGDARAARHTIIKESVADVFGAVLWILQSKNGTLLSMASDVALKLVSVLPNSMLQSHILDLVCCLSSLLSSHQIEVAIPCATALNLLISNLSATSEKAVMEALKETGTVICVVEKIKDFTEGVKKIEYFEEMVSLLSTILQRWPPSRFPVWNDAKLVKALANIHTRNDNSTKVVLLKFYTSLALCDSVARKLIDGGQIFLQLAVHAMGKSNPHIVRAEGFRLTQCLLTSEVDLSKAMDLCGEAIVDAIICGMKETVLSSKKNGNNYGSLLVEACQLALITRWSGDHHIRFWKQGIDRVLLNLLVKTIPDQSTEHVLSLEKQISMAKEGLKANYHLGLRSHLWDILGWLAIHCGETFNPYTHGSELHINLLITCACLTFVDTIQKWGRICQTDDDNFQSEPVSRAVLMMVYSPCNYISSHTRFLLSDLLKENGIPYLKNLLHTLDYTSSLASYGSSDKLQLAIILIGLTCLSSLTECQRCILKSKGIKAVVLIVKRCLSDDIHVERSSFAPHPHTTFHGRSCCRNDKEWEGSNVLLFYGLWYIAEYVHQCGLSEENSSKFTRDVTYIKAHLVSKLQKICSSASSSPGVRWYVSYILSYFGCYGFPNELAERFGKCLHEGEYADLRLIVANGNPVSAHGVILAVRCPSLLPPEVLPGSKSSKGVKYKVVGETMREVRLSAHVDYETLALLLEYVYLGYLHAGEETVKKLKILAKRCNLKPLLRMLYRQCPKWGTPFPSSDLSSSLDSAGSCFSDVILEAKPNKLVEWTCSICSHSVPHLHVHKVILQSGCDYLQGLFGSGMQESHSQVLKVDISWEALIKLVKLFYSNELPNPPSGCLWDNMNDEEKLFHLQPYLELCWLADYWICENMQEACWKVIMFCLDSTKQLSIKIIKMAYNLSLWKLVDIAANLIAPSYSQLRDSGELQEFDDVIVHLIYSASIRRLTQEGGNCFR 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0450 1016 PANTHER OS06G0674800 PROTEIN 4 1010 IPR044953 -
Lal20g0450 1016 SUPERFAMILY ARM repeat 46 666 IPR016024 -
Lal20g0450 1016 CDD BTB_POZ_ZBTB_KLHL-like 842 894 - -
Lal20g0450 1016 Pfam BTB/POZ domain 842 906 IPR000210 GO:0005515
Lal20g0450 1016 SUPERFAMILY POZ domain 814 941 IPR011333 -
Lal20g0450 1016 SMART BTB_4 687 797 IPR000210 GO:0005515
Lal20g0450 1016 SMART BTB_4 817 945 IPR000210 GO:0005515
Lal20g0450 1016 ProSiteProfiles BTB domain profile. 817 898 IPR000210 GO:0005515
Lal20g0450 1016 Gene3D Potassium Channel Kv1.1; Chain A 669 792 IPR011333 -
Lal20g0450 1016 Gene3D Potassium Channel Kv1.1; Chain A 802 985 IPR011333 -
Lal20g0450 1016 ProSiteProfiles BTB domain profile. 687 767 IPR000210 GO:0005515
Lal20g0450 1016 Gene3D - 45 376 IPR011989 -
Lal20g0450 1016 SUPERFAMILY POZ domain 668 791 IPR011333 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Lal20g0450 BTB 5.8e-06 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0450 - - gsj:114385670 1515.75