Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0441 ATGGCTATAGTCATAACCCCCGACACCGTTCAACGCGCCGTCGATTCTCTCCTCAAATGGCGCACTTCCCAATCCCAAACCCAAACCCCAAAACTCTTCGACCAAGACGATGAATTTGTCTACCTCATCCTCACTCTCAAGAAGGTTCCACCAAAGGGGCGCGTGAACCCACACAAAGTTCCTCTTCCTCATTCTCTAACATCTGAATTCTCTGAACGCTGCTTAATCATTGATGATAGACCCAAATCTAATCTTACCAAAGCAGATTCTCAGAAGAAGATCAAATCGGAGAATATTCCGATTTCGAAGGTTTTGAAGCTTTCGAAGTTGGCTTCTGATTACCGTGCCTTCGAGGCGAAGCGTAAGTTGTGTAATTCTTATGATATGTTTTTTGCTGATAAGAGGATTGTGCCATTGCTGCCTAGGTTGTTAGGGAAACAGTTTTTTAAGAAGAAGAAGATTCCGGTGCCGTTGGATTTGAAGAAGAATAATTGGAAGGAGCAGGTTGAGAAGGCGTGTTCTTCGGGTTTGTTGACGCTTAGGACTGGGACTTGCAGTGTTGTTCGGGTTGCGAAGCTGAGTATGGAGAGGGATGAGATTGTGGAGAATGTGGTTGCGGCGATTGATGGGGTTATTGAGATTATTCCGAAGAAATGGGGGAATGTGAGGTCTTTTCATGTTAAGTTGTTGGAGTCGCTTGCGCTTCCGGTTTATCAGGCTGTTCCGGATATTAAATTGAGGATTGATGGAAGTAAGGCTGAGGAGGAGGAGGCTGAGATAAAGAAGAAAGAGGAGAGTGAGAAAGAGGAGGAGAGTGAGGGTGGAGAGGTTAGTGATCGGAAGGTGGGGAAGAAGAAGAAGGGGAGGATTCATCAAGTTAGGTACATGGATGATGATAAAGTTGGTGAGGATGTTGTTGAAGATAAGTCGGGTGGTGGTAATGATGATAAGGATGCAGGTGATTCTGACAATGATGAAAAGGATAGTGCAGAATTGGTGAGTATGAAGAGAAAGAAAGGCGTGAAAGTCGGTAATGGAGCTGTAAGTGAGTTGAGCAGTGTCAAGAAGAAGTTGAAGAAATCTGCCAAGGAAAGCATCAGACAGAAGAAAGATGTGAAGGAAAATTTGGTCGAGCAAAGTAAAAGTGAGGATGAAGAGTCTGCTGGCAAGAAGAAGAAGAAAGCGATCAAGCAAAATAAAAGTGAAGATGTAGAGAGTGCTGGCAAGAAGAAGAAGCTGATCAAGCAAAATAAAAGTGAGGATGAAGAGTCTCTCGGCAAGAAGAAGAAGGTGATCTAA 1299 0.4403 MAIVITPDTVQRAVDSLLKWRTSQSQTQTPKLFDQDDEFVYLILTLKKVPPKGRVNPHKVPLPHSLTSEFSERCLIIDDRPKSNLTKADSQKKIKSENIPISKVLKLSKLASDYRAFEAKRKLCNSYDMFFADKRIVPLLPRLLGKQFFKKKKIPVPLDLKKNNWKEQVEKACSSGLLTLRTGTCSVVRVAKLSMERDEIVENVVAAIDGVIEIIPKKWGNVRSFHVKLLESLALPVYQAVPDIKLRIDGSKAEEEEAEIKKKEESEKEEESEGGEVSDRKVGKKKKGRIHQVRYMDDDKVGEDVVEDKSGGGNDDKDAGDSDNDEKDSAELVSMKRKKGVKVGNGAVSELSSVKKKLKKSAKESIRQKKDVKENLVEQSKSEDEESAGKKKKKAIKQNKSEDVESAGKKKKLIKQNKSEDEESLGKKKKVI 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0441 432 MobiDBLite consensus disorder prediction 257 283 - -
Lal20g0441 432 Coils Coil 248 273 - -
Lal20g0441 432 MobiDBLite consensus disorder prediction 257 432 - -
Lal20g0441 432 Gene3D - 83 175 IPR016095 -
Lal20g0441 432 MobiDBLite consensus disorder prediction 291 338 - -
Lal20g0441 432 MobiDBLite consensus disorder prediction 353 432 - -
Lal20g0441 432 SUPERFAMILY Ribosomal protein L1 29 238 IPR023674 -
Lal20g0441 432 CDD Ribosomal_L1 10 237 IPR028364 -
Lal20g0441 432 PANTHER RIBOSOMAL L1 DOMAIN-CONTAINING PROTEIN 1 6 297 - -
Lal20g0441 432 Coils Coil 355 383 - -
Lal20g0441 432 Pfam Ribosomal protein L1p/L10e family 29 232 IPR028364 -
Lal20g0441 432 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 6 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0441 Lal-Chr20 3580529 3581827 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0441 126 228 Cytoplasmic Ribosomal Protein Gene Family AT2G27530 29.126 2.99e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0441 K14775 - gmx:100782862 426.402