Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0429 ATGGCATTGGAATGTAGTTTCCACATGATGATGCTATTGTTTTGCTTTGGTATTATCATTGTAAGTTCAATCAATGAAGAGGGTTCAAGTCTTTTGAAGTTCAAGAGTTCAATCATTGACCCTCAAAACAATCTACATGACTGGAATTCTTCTGATTCCACTCCTTGCAATTGGAATGGTGTGCATTGCAAGGCTTCAGTGGTAACTTCTGTGAAACTCAATCACCTTAATCTCTCTGGTACTTTATCTCATAGCATATGTAACCTTCCATGGCTACTTGAGTTGAACCTGTCAAAGAATTTCATTTCTGGCCCTATTCCTGAGGGTTTTGTTGATTGCCATAGATTAGAGATTTTAGACCTTTGTACAAATAGGCTTCATGGGCCTCTTTTTCTGACCCCTATTTGGAAAATCAAACCACTTAGAAAGCTTTACCTTTGTGAGAATTATATGTATGGTGAAGTGTCAGAGCAGCTTGGGAATTTGGTGTCACTTGAGGAGCTAGTTATTTATAGCAATAACATAACCGGGAAAATTCCGAAATCAATCAGTAAGTTGAAGCACCTTAGAGTTATTAGAGCAGGCCTGAATGGCCTATCAGGGCCAATACCTTCAGAAATTAGTGAGTGTGAGAGCTTGGAGATATTGGGTTTGGCACAGAATAAGTTAGAAGGTTCTATTCCAAGGGAGCTTCAAAAGCTTCAGAACCTTACTAACTTGATTCTGTGGCAAAACACTTTATCAGGCGAGATTCCTCCCGAAATTGGGAATATCCGTAGCCTGGAGTTGCTGGCTTTGCATCAAAATTCATTTAGTGGTGATGTCCCCGTGGATCTTGGGAAACTGTTGCGGTTGAAGAGGTTGTACATATACACCAACCAGCTGAATGGGACAATTCCACCAGAGCTAGGGAACTGCACAAATGCTGTTGAGATAGATCTATCGGAAAATCGTTTGATCGGGATCATTCCGAAAGAGCTTGGTCAGATATCTAATCTTAGTTTGCTTCATCTATTTGAAAACCATCTTCACGGATATATTCCTAAGGAGCTTGGCCAGTTGAAGCTGCTCAAATATTTAGACCTTTCGATGAATAACTTAACAGGTACAATCCCACTGGAATTTCAAAATCTTACATATATTGAGGATTTGCAGCTCTTTGATAATCATCTTGGGGGCATGATTCCTCCTTATCTTGGAGCTACTCGAAACCTTAAAATTCTCGATATATCTGCGAATAATCTTGTCGGTATGATACCTGTCCATCTTTGTGAATATCAGAAGCTGCAATTCTTGAGCCTTGGCTCAAATAGGTTGTTTGGAAATATTCCTTATAGCCTGAAAACTTGCAAGTCTCTTGTGCAGCTAATGCTAGGGGGTAACCAATTGGCAGGAAGCCTACCTGTTGAAATGTATGAACTTCACAATCTTACGGCGCTTGAACTTTATCAGAACCAGTTCTCTGGGATAATAAACCCGGGGATAGGTCAACTTAAAAATTTGGAGAGGCTTCTCTTGTCAGATAATTATTTTGTTGGCTATCTGCCCTCTGAGATTGGGAATTTATCGCAGCTTGTCTCGTTCAATGTTTCCTCTAATCGCCTCACAGGAAGTATTCCTCGTGAGCTAGGAAACTGTTTAAGACTGCAAAGGCTTGATCTCAGCAGGAACCGGTTCAGTGGTGGCCTTCCTATTGAAGTTGGTAATCTGGTGAATTTGGAGCTGTTGAAAATTTCGGATAATAGACTCTATGGAGAAATACCAGGCACTTTGGGGAACCTTAATCGTCTCACAGCGCTCGAGCTAGGTGGCAACCAGTTTTCGGGAAGCATTCCGTATCATTTGGGAAGACTTGCAGCTCTTCAGATTGACCTTAACCTGAGCCACAACAAGATGTCCGGCACAATTCCTGACAGCCTAGGGAACTTGCAAATGCTCGAGTCACTTTACTTAAATGACAATCAACTTGTTGGTGAAATTCCTAATTCAATTGGTAACCTTCCAAGTCTTATAGTTTGCAATGTATCCGACAACAAGCTGGTAGGATCTGTTCCAGACACCCCTGCATTTAGAAAGATGGATTTGACAAACTTTGGTGGGAACAACGGCTTGTGCCGAGTAGGTTCTGATCATTGTCATTCACCTGTACCTTCTTCTCGTGCAGCAAAACCAAGCTGGTTCAGAGATGGTTCATCAAGGGAAAAGATAGTGAGCGTTGCTTGTGGCGTAGTTGGATTAGTTTCTCTTATTTTCATAGTCTGTATATGTTCGGCCATGAGGCGCCGCAGACCTACTTTTGTTTCAGTTGAAGGGCAAATGAAGCCTCAAGTCTTAGATAACTATTACTTTCCTAAAGAAGGCTTTAAATACCAGGATCTTTTGGAAGCCACTGGCCGCTTTTCGGAAACTGCAGTTTTAGGAAGTGGAGCTTGTGGCACTGTCTACAAGGCTATTATGAATGATGGTGAGGTGATTGCTGTCAAAAAGCTGAAGTCACACGGAGAAGGAGCAAATGTTGACCGAAGCTTCCTTGCCGAGATTTCAACACTCGGAAAGATCAGGCACAGGAACATTGTGAAATTGTATGGATTTTGTTACCATGAGGATTCTAATCTTCTCTTATATGAATACATGGAAAATGGAAGCCTTGGCGAACAACTTCATTCAAAAACATCGAACTGCATGCTGGATTGGAGCAGTCGATACAAAATTGCTCTCGGTGCAGCAGAAGGCTTATGCTATCTTCATTATGATTGCAAGCCTCAAATCATTCACCGCGATATTAAATCGAGCAACATATTACTTGATGAAGTGTTTCAAGCTCATGTCGGAGACTTTGGCTTGGCAAAGTTGATTGACTTTTCATACTCAAAATCCATGTCTGCTGTAGCAGGATCATATGGCTACATAGCCCCAGAATATGCTTATACAATGAAGGTAACTGAGAAATGTGACATCTATAGCTTTGGGGTAGTTTTGCTGGAACTAGTTACTGGGAAGTCACCTGTTCAACCTTTGGAACAAGGTGGCGATCTAGTGACTTGGGTGAGACGGGCGATTCAAGCAGCACTACCAACTTCTGAACTACTCGACAAGCGATTGAATCTGAGTGCGCAAAAAACAGTCGAAGAAATGTCTCTTATTCTCAAAATTGCTCTATTTTGCACCAGTACATCTCCAATTAAGAGGCCTACAATGAGAGAGGTCATTGCGATGTTGATCGATGCTAGGGAATATGCCAATAATTCACCAGTCTCTCCTACTTCAGAATCTCCACTGGATGAAGGTGTATCTTCCAAAGGTTAG 3306 0.4165 MALECSFHMMMLLFCFGIIIVSSINEEGSSLLKFKSSIIDPQNNLHDWNSSDSTPCNWNGVHCKASVVTSVKLNHLNLSGTLSHSICNLPWLLELNLSKNFISGPIPEGFVDCHRLEILDLCTNRLHGPLFLTPIWKIKPLRKLYLCENYMYGEVSEQLGNLVSLEELVIYSNNITGKIPKSISKLKHLRVIRAGLNGLSGPIPSEISECESLEILGLAQNKLEGSIPRELQKLQNLTNLILWQNTLSGEIPPEIGNIRSLELLALHQNSFSGDVPVDLGKLLRLKRLYIYTNQLNGTIPPELGNCTNAVEIDLSENRLIGIIPKELGQISNLSLLHLFENHLHGYIPKELGQLKLLKYLDLSMNNLTGTIPLEFQNLTYIEDLQLFDNHLGGMIPPYLGATRNLKILDISANNLVGMIPVHLCEYQKLQFLSLGSNRLFGNIPYSLKTCKSLVQLMLGGNQLAGSLPVEMYELHNLTALELYQNQFSGIINPGIGQLKNLERLLLSDNYFVGYLPSEIGNLSQLVSFNVSSNRLTGSIPRELGNCLRLQRLDLSRNRFSGGLPIEVGNLVNLELLKISDNRLYGEIPGTLGNLNRLTALELGGNQFSGSIPYHLGRLAALQIDLNLSHNKMSGTIPDSLGNLQMLESLYLNDNQLVGEIPNSIGNLPSLIVCNVSDNKLVGSVPDTPAFRKMDLTNFGGNNGLCRVGSDHCHSPVPSSRAAKPSWFRDGSSREKIVSVACGVVGLVSLIFIVCICSAMRRRRPTFVSVEGQMKPQVLDNYYFPKEGFKYQDLLEATGRFSETAVLGSGACGTVYKAIMNDGEVIAVKKLKSHGEGANVDRSFLAEISTLGKIRHRNIVKLYGFCYHEDSNLLLYEYMENGSLGEQLHSKTSNCMLDWSSRYKIALGAAEGLCYLHYDCKPQIIHRDIKSSNILLDEVFQAHVGDFGLAKLIDFSYSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELVTGKSPVQPLEQGGDLVTWVRRAIQAALPTSELLDKRLNLSAQKTVEEMSLILKIALFCTSTSPIKRPTMREVIAMLIDAREYANNSPVSPTSESPLDEGVSSKG 1101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0429 1101 Gene3D Phosphorylase Kinase; domain 1 768 877 - -
Lal20g0429 1101 SMART LRR_typ_2 474 498 IPR003591 -
Lal20g0429 1101 SMART LRR_typ_2 522 546 IPR003591 -
Lal20g0429 1101 SMART LRR_typ_2 162 186 IPR003591 -
Lal20g0429 1101 SMART LRR_typ_2 643 667 IPR003591 -
Lal20g0429 1101 SMART LRR_typ_2 570 593 IPR003591 -
Lal20g0429 1101 SMART LRR_typ_2 282 306 IPR003591 -
Lal20g0429 1101 SMART LRR_typ_2 234 258 IPR003591 -
Lal20g0429 1101 SMART LRR_typ_2 594 618 IPR003591 -
Lal20g0429 1101 SMART LRR_typ_2 354 377 IPR003591 -
Lal20g0429 1101 SUPERFAMILY RNI-like 246 560 - -
Lal20g0429 1101 ProSiteProfiles Protein kinase domain profile. 800 1080 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal20g0429 1101 Gene3D Ribonuclease Inhibitor 178 276 IPR032675 -
Lal20g0429 1101 PANTHER OS07G0152200 PROTEIN 9 1084 - -
Lal20g0429 1101 Gene3D Ribonuclease Inhibitor 277 372 IPR032675 -
Lal20g0429 1101 Gene3D Ribonuclease Inhibitor 373 471 IPR032675 -
Lal20g0429 1101 SUPERFAMILY L domain-like 488 707 - -
Lal20g0429 1101 MobiDBLite consensus disorder prediction 1081 1101 - -
Lal20g0429 1101 Pfam Leucine rich repeat N-terminal domain 25 63 IPR013210 -
Lal20g0429 1101 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 9 1084 - -
Lal20g0429 1101 SMART serkin_6 800 1080 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal20g0429 1101 Pfam Leucine Rich Repeat 357 378 IPR001611 GO:0005515
Lal20g0429 1101 Pfam Leucine Rich Repeat 646 667 IPR001611 GO:0005515
Lal20g0429 1101 Gene3D Ribonuclease Inhibitor 23 177 IPR032675 -
Lal20g0429 1101 Gene3D Ribonuclease Inhibitor 587 712 IPR032675 -
Lal20g0429 1101 Gene3D Ribonuclease Inhibitor 472 586 IPR032675 -
Lal20g0429 1101 SUPERFAMILY L domain-like 26 296 - -
Lal20g0429 1101 SUPERFAMILY Protein kinase-like (PK-like) 775 1073 IPR011009 -
Lal20g0429 1101 Pfam Protein kinase domain 801 1070 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal20g0429 1101 Gene3D Transferase(Phosphotransferase) domain 1 878 1090 - -
Lal20g0429 1101 ProSitePatterns Serine/Threonine protein kinases active-site signature. 923 935 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0429 Lal-Chr20 3471342 3475406 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0429 18 1080 Receptor kinase-like Gene Family AT1G73080 37.668 0.0 625
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lal20g0429 Pkinase 1.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0429 - - gmx:100818311 1788.47