Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0425 ATGGCAAATATGAGCATCAACTTGGTGCTTTATCATGGGTCATTGTTGCCCCATGAACTTGTTCCTTCTCAGCTGAGACTTGCAAGAACAAGAGTATTGGCAACAAATAGAGCCCTTGAAGTTTCCACAGAAAGGTGGAGCTTCTATGGTTCTTCTTGTTGTTGTTATTGCTTCCATTTCAATGGATGCAGCTGCAGGTGGAAATGGCTTGTTAGAAGTTGCTCCACCATTGAGTCTGTTATTGCTAGTGATGAAAATTATGGCAATAAACAGGTTGTTAGTCTCACGCCGCGCCTATACAACTACATCCTCGAAAATGTTCGAGAACCAGAGATTCTAAGACAATTGCGAGAGGACACGGCCTCTATGCGTGGAAGTCAGATGCAGGTGTCTCCTGAACAGGCACAACTGCTTGCAATGCTTGTGCAGACTCTTGGAGCAGAACGATGTATTGAAGTTGGCATTTATACTGGTTACTCATCACTGGCCATAGCATTAGTCCTGCCAGAATCAGGTTATTTGGCCGCCTGCGAAAGAGATGCCAAATCTCTTGAAGTTGCTAAGAAGTATTATCACCTAGCTGGTGTTTCACATAAGGTGGATGTAAAACAAGGACTTGCAGCAGAGTCTCTAGAGTTTTTAATTCTGAATGGTGAAGCAGGCAGCTATGACTTTGCATTTATTGATGCCGATAAAAGAATGACTCCTAAATATTTTGAACTGCTACTACAACTGGTCAGAGTTGGAGGTCTTATTGTGATTGATAATGTTCTTTGGCATGGAAAAGTTGCAGATCCACTGGTAAATGATTCCAAGACTATCAGCATTAGAAATTTTAACCAACAGTTAATGGAAGACAAGCGTGTAAGCATTAGTATGGTAAGTTCCTATTGGAGATGGGATAACAATCTGTCGAAAAAATTGACTCATTTTCTGATGAATGCATTGGTATGTCTAGCAATTGAAGTTACTTACTCCCTTTGGGTTGGAGTAAAGCAAAGTTTTGTAATTAGCACAAAAACCAATATTTTCATATGCTCACTTTGGGAAGGACCTGAAAACTGCATACTGAAGAATAACAGTTCCTTACTGTCCATTTGCGAGTTGGATTTGGACCGGAAGACAACACATCGTCAATATTTACAAGATTAA 1152 0.4054 MANMSINLVLYHGSLLPHELVPSQLRLARTRVLATNRALEVSTERWSFYGSSCCCYCFHFNGCSCRWKWLVRSCSTIESVIASDENYGNKQVVSLTPRLYNYILENVREPEILRQLREDTASMRGSQMQVSPEQAQLLAMLVQTLGAERCIEVGIYTGYSSLAIALVLPESGYLAACERDAKSLEVAKKYYHLAGVSHKVDVKQGLAAESLEFLILNGEAGSYDFAFIDADKRMTPKYFELLLQLVRVGGLIVIDNVLWHGKVADPLVNDSKTISIRNFNQQLMEDKRVSISMVSSYWRWDNNLSKKLTHFLMNALVCLAIEVTYSLWVGVKQSFVISTKTNIFICSLWEGPENCILKNNSSLLSICELDLDRKTTHRQYLQD 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0425 383 PANTHER CATECHOL O-METHYLTRANSFERASE DOMAIN-CONTAINING PROTEIN 1 79 295 - -
Lal20g0425 383 Gene3D Vaccinia Virus protein VP39 81 298 IPR029063 -
Lal20g0425 383 Pfam O-methyltransferase 107 295 IPR002935 GO:0008171
Lal20g0425 383 PANTHER O-METHYLTRANSFERASE-RELATED 79 295 - -
Lal20g0425 383 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 98 294 IPR029063 -
Lal20g0425 383 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 89 310 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0425 Lal-Chr20 3450558 3454877 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0425 68 308 Monolignol Biosynthesis Gene Families AT3G62000 72.951 2.28e-131 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0425 - - gmx:100776619 437.573