Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0403 ATGGAGAAAGAAGGTTCAGAGACGAGAAATCAATCGAGGCTTGCCATTCTCGAACTAGCCAACATGATAAGCGTTCCCATGTCACTAAACGCCGTCGTACGTCTCAATGTAGCTGACGCTATCTGGCAAGGCGGTTCCAACACCCCACTCTCCGCCGATCAGATCATCAGCCGCGTCATTCACTCCGGCGGCGACGCCGACAACCTCCAGCGCATCCTCCGTATGCTATCGAGTTATGGAGTGTTTGAGGAACACGTGAGTGAAGGAGAGAGGAAATATTCGCTCACAGATGTTGGCAAAACGCTGGTTACTGATGAGGATGGCTTATCCTATGGTCCGTACGTGCTACAGCATCACCAGGATGCTTTGATGCGAGCATGGCCATTGGTACATGAGGCAGTTGTGGACCCTAATAAGGAGCCATTTGATAAGGCCAATGGTGAACCAGCTTATGGGTATTACTCGAAGCAGCCAGAGATGAACGAGTTAATGGTTAAGGCCATGTCAGGTGTATCAGTACCCTTCATGAGAGCCATGTTGGAGGGCTATGACGGCTTCCAAGGTGTCGAGAGGTTGGTGGATGTGGGTGGCAGCGGCGGCGACTGCCTCCGTATGATCTTGCAAAAACACCCCAATGTTAAGGAAGGCATCAATTTTGACCTGCCTGAAGTGGTGGCCAAAGCACCACAAATTCCACGTGTGACGCATGTGGGTGGTGACATGTTCAAATCAATTCCCCAAGGAGATGCTATCTTTATGAAGTGGGTTCTAACAACATGGACTGATGAGGAATGCAAGCAAATAATGCAGAACTGTTACAAGTCACTCCCTGAAGGAGGCAAATTGATTGCTTGTGAGCCGGTGCTACCGGAACATTCCGATGACAGTCACAGAACCAGAGCCTTACTTGAGGGTGACATATTTGTGATGACCATTTACAGAGCCAAAGGGAAGCATAGGACTGAAGAACAGTTCAAGCAACTTGCCATTTCTGTTGGTTTCCCTAGTTTCAGATCATTCCATGTTGACCATTTCTATACTGTTCTTGAGTTTCAGAAATGA 1062 0.4849 MEKEGSETRNQSRLAILELANMISVPMSLNAVVRLNVADAIWQGGSNTPLSADQIISRVIHSGGDADNLQRILRMLSSYGVFEEHVSEGERKYSLTDVGKTLVTDEDGLSYGPYVLQHHQDALMRAWPLVHEAVVDPNKEPFDKANGEPAYGYYSKQPEMNELMVKAMSGVSVPFMRAMLEGYDGFQGVERLVDVGGSGGDCLRMILQKHPNVKEGINFDLPEVVAKAPQIPRVTHVGGDMFKSIPQGDAIFMKWVLTTWTDEECKQIMQNCYKSLPEGGKLIACEPVLPEHSDDSHRTRALLEGDIFVMTIYRAKGKHRTEEQFKQLAISVGFPSFRSFHVDHFYTVLEFQK 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0403 353 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 17 353 IPR016461 GO:0008168
Lal20g0403 353 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 107 351 IPR029063 -
Lal20g0403 353 CDD AdoMet_MTases 191 285 - -
Lal20g0403 353 SUPERFAMILY "Winged helix" DNA-binding domain 9 105 IPR036390 -
Lal20g0403 353 PANTHER OS02G0823400 PROTEIN 5 352 - -
Lal20g0403 353 Pfam O-methyltransferase domain 131 334 IPR001077 GO:0008171
Lal20g0403 353 PANTHER O-METHYLTRANSFERASE 5 352 IPR016461 GO:0008168
Lal20g0403 353 Gene3D - 1 106 IPR036388 -
Lal20g0403 353 PIRSF O-mtase 1 353 IPR016461 GO:0008168
Lal20g0403 353 Gene3D Vaccinia Virus protein VP39 107 353 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0403 Lal-Chr20 3235461 3241812 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0403 1 353 Monolignol Biosynthesis Gene Families AT3G53140 75.209 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0403 - - gmx:100784957 622.468