Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0392 ATGACGTCAGGGACGAGGCAACCAACATGGAAGGAGAGAGAGAACAACAAGAGGAGAGAGAGGAGGAGAAGAGCGATAGCGTCGAAGATCTTCTCTGGTTTGAGGATGTACGGAAACTTCAAGCTTCCTAAGCATTGTGACAATAATGAAGTTCTCAAAGCTCTTTGTGATGAGGCTGGTTGGACCGTTGAAGCTGACGGCACCACGTATAGGAAGGACTATCAGATATTTTTTCGAACAAAGATTCTCTTCATCAATGGAGATTTGTCATTTTTGGTGCCACATGTCATTGTCGTTACCTTGGTCTGGACTTTCCGCTGCAGCTTTGTTGATGACGCTCAGAATAAAGGATGCAAGCCAGTTGAACAAATGGACATAGGTGGTTCTTCAATGGCAACCCCATGTTCATCTTATAATCCAAGTCCCTGTGCTTCATACAATCCAAGTCCAGGCTCTTCTTCCTTCCCAAGCCCATGCTCATCCTTCAATGCTGCAAATCCTAACAATCCTGCAGATGGCAATTCCCTCATTCCATGGCTCAAAAACCTCTCATCAGGGTCATCATCAGCTTCCTCATCCAAGTTTTCACATCTATACATTCACAGTGGCTCCATCAGTGCCCCTGTCACTCCTCCACCGAGCTCTCCAACTGTGGGAACACCGCGACTCAAAGCCGATTGGGAGGATCAATCCAACTCCAATCGTCCTCCCTGGCTTGGGCAGCAGCAGTACTCATTCCCACCCTCTTCCACCCCTCCAAGCCCGGGCCGCCAGGTTCTCGACCCGAATTGGTTTGCTGGGATCAGAATTCCTCTGGGTGGACAAGCTTCTCCAACCTTCAGTCTGGTGGCTAATTCAAACCCATTTGGGTTCAAGGAAGAGGTTTTTGTTGGAAGTACTAGTGGCTCTCGCATGTGGACACCTGGACAAAGTGGTACATGTTCTCCAGCTGTGGCTGCAAGCTCTGATCACACTGCTGACATTCCAATGACTAATGCAGTTTCAGATGAATTTGCCTTTGGAAGCAGCACCACTGTTGGTTTAGTGAAGCCCTGGGAAGGAGAGAGGATCCATGAAGAAATTGTATCAGATGATCTTGAGCTCACTCTTGGAAACTCAAAGACCAGGTAG 1131 0.481 MTSGTRQPTWKERENNKRRERRRRAIASKIFSGLRMYGNFKLPKHCDNNEVLKALCDEAGWTVEADGTTYRKDYQIFFRTKILFINGDLSFLVPHVIVVTLVWTFRCSFVDDAQNKGCKPVEQMDIGGSSMATPCSSYNPSPCASYNPSPGSSSFPSPCSSFNAANPNNPADGNSLIPWLKNLSSGSSSASSSKFSHLYIHSGSISAPVTPPPSSPTVGTPRLKADWEDQSNSNRPPWLGQQQYSFPPSSTPPSPGRQVLDPNWFAGIRIPLGGQASPTFSLVANSNPFGFKEEVFVGSTSGSRMWTPGQSGTCSPAVAASSDHTADIPMTNAVSDEFAFGSSTTVGLVKPWEGERIHEEIVSDDLELTLGNSKTR 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0392 376 PANTHER BES1/BZR1 HOMOLOG PROTEIN 4 116 376 - -
Lal20g0392 376 PANTHER BES1/BZR1 HOMOLOG PROTEIN 4 1 72 - -
Lal20g0392 376 MobiDBLite consensus disorder prediction 226 247 - -
Lal20g0392 376 MobiDBLite consensus disorder prediction 1 20 - -
Lal20g0392 376 MobiDBLite consensus disorder prediction 206 260 - -
Lal20g0392 376 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 116 376 IPR033264 GO:0003700|GO:0006351|GO:0009742
Lal20g0392 376 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 72 IPR033264 GO:0003700|GO:0006351|GO:0009742
Lal20g0392 376 Pfam BES1/BZR1 plant transcription factor, N-terminal 3 184 IPR008540 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0392 Lal-Chr20 3115158 3121168 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0392 1 376 BZR Transcription Factor Family AT1G78700 58.961 5.02e-112 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Lal20g0392 BES1_N 1.4e-60 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0392 - - lang:109348092 526.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0392 20 3115158 3121168 Lal20g0392 20 3115158 3121168 ECH
Lal20g0392 20 3115158 3121168 Lal1g1611 1 18526043 18537097 LSH