Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0378 ATGTCCACCACTCACGCTTTCTCCCAATTCCACCACTCTTGGTTCAACCGCCTCCACCACATTCTCCAACAACTTTCCTCCACCGCCGCCACTCTCCGACCACCCCTCACGCCGGAGCAAAACAACACGCTACGCCACCTCATTGACAAGGTCATGTCTCACCACCACGACTATTACCGCGCTAAGTCATTCGCCGCCGAGAAGGATCCTCTCACCGTGTTTGTCTCACCTTGGGCCACCACATTAGAACGGTCCCTTCATTGGATCGCTGGGTGGCGTCCTACAACCGCGTTCCATCTGGTGTATACTGAATCGTCGGTTCAGTTTGAGTCGCACATTGTTGATATACTTCGCGGTATTCGAACAGGTGACCTTGGTGATCTTTCGCCGGCTCAGTTCCGCCGAGTAAGCGAGTTACAATGTGACACTGTGAAGGAAGAGAATGCAATAACAGAGGAGCTATCAGAGTGGCAGGAGAGTGCTAGCGAAATGATGGGCCCACGAGCTGATATAAACGACAAGATCGGACGGTTGGTAACTATTATTAAAAAAGCGGACGATCTACGGCTCAGAACGCTCAAGAGCATGATAGATTTGCTGTCGCCGCAGCAGGCTATTCAATTCTTGATCGCTTCTGCAGAGTTGCTCGTTGGTATCCGTGGATGGGGATTAAATCATGACCGTTAA 687 0.5124 MSTTHAFSQFHHSWFNRLHHILQQLSSTAATLRPPLTPEQNNTLRHLIDKVMSHHHDYYRAKSFAAEKDPLTVFVSPWATTLERSLHWIAGWRPTTAFHLVYTESSVQFESHIVDILRGIRTGDLGDLSPAQFRRVSELQCDTVKEENAITEELSEWQESASEMMGPRADINDKIGRLVTIIKKADDLRLRTLKSMIDLLSPQQAIQFLIASAELLVGIRGWGLNHDR 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0378 228 ProSiteProfiles DOG1 domain profile. 4 228 IPR025422 GO:0006351|GO:0043565
Lal20g0378 228 Pfam Seed dormancy control 32 103 IPR025422 GO:0006351|GO:0043565
Lal20g0378 228 PANTHER DNA-BINDING PROTEIN-LIKE PROTEIN 3 228 - -
Lal20g0378 228 PANTHER - 3 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0378 Lal-Chr20 3023949 3026216 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0378 6 211 bZIP Transcription Factor Family AT5G06950 25.000 3.84e-16 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0378 - - gmx:778192 330.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0378 20 3023949 3026216 Lal20g0378 20 3023949 3026216 ECH