Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0359 ATGGCGAAAACCAGACCAGGAAAAAGAGACATAGACTCATACACAATCAAAGGCACAAACAAGATCGTAAGAGCTGGAGATTGTGTTTTGATGCGTCCTTCAGACACGAGCAAGCCACCATATGTGGCACGTGTGGAGAAGATTGAGCAGGATGGTAGGAACAATGTGAAGGTCCGTGTGAGATGGTATTATAGGCCTGAAGAGTCTATTGGAGGAAGAAGGCAATTCCATGGAGCAAAGGAGCTTTTTTTGTCTGATCATTATGATATTCAGAGTGCTCACACCATTGAAGGGAAGTGTGTTGTGCACTCCTTCAAGAACTATACTAAGCTTGAAAATGTAGGTGCTGAGGATTATTATTGTAGGTTTGAGTATAAGGCTGCTACTGGGGCTTTCACGCCTGACCGTGTTGCTGTGTATTGCAAATGTGAGATGCCTTATAACCCGGATGACCTCATGGTGCAGTGTGAGGGGTACCATCCTGCTTGTGTGGGCATGACTATTGAAGAAGCAAAGAAATTGGACCATTTTGTATGTTCCGAATGCTCATCTGACGATGACTTGAAGAAACCCCAGGTTACATTTCCAGTATCACCGGCATCTGATGGCAAGGTGGAGCCAAAACGGCGGAAGAGAGGACCGTGA 645 0.4558 MAKTRPGKRDIDSYTIKGTNKIVRAGDCVLMRPSDTSKPPYVARVEKIEQDGRNNVKVRVRWYYRPEESIGGRRQFHGAKELFLSDHYDIQSAHTIEGKCVVHSFKNYTKLENVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGYHPACVGMTIEEAKKLDHFVCSECSSDDDLKKPQVTFPVSPASDGKVEPKRRKRGP 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0359 214 MobiDBLite consensus disorder prediction 183 214 - -
Lal20g0359 214 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 135 194 IPR013083 -
Lal20g0359 214 PANTHER OS08G0421900 PROTEIN 3 209 - -
Lal20g0359 214 Pfam BAH domain 23 135 IPR001025 GO:0003682
Lal20g0359 214 PANTHER BNAC03G64850D PROTEIN 3 209 IPR045205 GO:0006325|GO:0035064
Lal20g0359 214 ProSiteProfiles BAH domain profile. 21 136 IPR001025 GO:0003682
Lal20g0359 214 SUPERFAMILY FYVE/PHD zinc finger 132 186 IPR011011 -
Lal20g0359 214 SMART BAH_4 21 136 IPR001025 GO:0003682
Lal20g0359 214 SMART PHD_3 140 183 IPR001965 -
Lal20g0359 214 CDD BAH_BAHCC1 22 156 - -
Lal20g0359 214 Gene3D - 2 134 IPR043151 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0359 Lal-Chr20 2891126 2895013 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0359 31 132 Core DNA Replication Machinery Family AT4G14700 29.126 9.92e-11 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0359 K25868 - gmx:100800993 432.95