Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0357 ATGGCTCAGTTACCTCCTAAAATTCCAACCATACCCCAAAATTCTCCTTCATTTCATCACCAAAGAGCATCTTCAATGTCCAACTTCATTCCCTCTTCAACCACTCTTCTTCATCATCAACAACAACAACAACAACAACAAAATTTGCCATCATGGGTTGATGAATTTCTAGACTTCTCTTCGTCACGGCGAGGATCTCACCGGCGATCCGCCAGCGACTCAATTACATTTCATGAGACGGCGTTCGATGGGTTGGACGAGGATCAGCTGGTTTCTATGTTCTCTGATGATTACGCCACCGTGGGGGTGCCGCCGGTGCAGACTTCTTCCACGTCAAACCCGTCGTCGCCGTGCTCCGACCAGAATAGTAATAATGATGACAAGCCAATGGCAATGGCGTTGGACGTTGTGAATCATGAGGTTAAGCCTGAGAATGAAACGGTTGAGGAGGAGAGCTCTTGCAAGAATGATGCGGCGGCGCAGCCACCCTTTGCCGCCACTACCGGTTGCACTGAAACCGTCTCTGATCCAAAAAGGGTCAAAAGCAGAATTTTGGCTAACAGGCAATCAGCTCAAAGGTCAAGGGTGAGAAAGCTACAATACATTTCTGAGCTTGAAAGGAGTGTAACAAGTTTGCAGAGTGAGGTATCAGCATTATCACCAAGAGTTGCATTTTTGGACCACCAACGCTTGATTCTAAATGTCGACAACAGTGCCTTGAAGCAACGGATTGCAGCTTTGGCCCAAGATAAGATTTTCAAAGATGCTCATCAAGAAGCATTAAAGAATGAAATAGAAAGACTGAGACAAATATATGTTCAGCAACAGAACCTACAAAAGATGGGTAACTCAATAAACAACAATGGACATGGTCGTCAATCTCCACAACCACAAATGCAACCTCATCATTCTCTTCATCATCAACAACCATTGACATGCATGGACAAAGAACAACTCCTAAGTTGA 966 0.4493 MAQLPPKIPTIPQNSPSFHHQRASSMSNFIPSSTTLLHHQQQQQQQQNLPSWVDEFLDFSSSRRGSHRRSASDSITFHETAFDGLDEDQLVSMFSDDYATVGVPPVQTSSTSNPSSPCSDQNSNNDDKPMAMALDVVNHEVKPENETVEEESSCKNDAAAQPPFAATTGCTETVSDPKRVKSRILANRQSAQRSRVRKLQYISELERSVTSLQSEVSALSPRVAFLDHQRLILNVDNSALKQRIAALAQDKIFKDAHQEALKNEIERLRQIYVQQQNLQKMGNSINNNGHGRQSPQPQMQPHHSLHHQQPLTCMDKEQLLS 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0357 321 MobiDBLite consensus disorder prediction 102 129 - -
Lal20g0357 321 Coils Coil 258 278 - -
Lal20g0357 321 MobiDBLite consensus disorder prediction 1 25 - -
Lal20g0357 321 MobiDBLite consensus disorder prediction 281 307 - -
Lal20g0357 321 Pfam bZIP transcription factor 181 224 IPR004827 GO:0003700|GO:0006355
Lal20g0357 321 PANTHER BASIC LEUCINE ZIPPER 2 1 298 - -
Lal20g0357 321 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 183 197 IPR004827 GO:0003700|GO:0006355
Lal20g0357 321 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 177 229 IPR004827 GO:0003700|GO:0006355
Lal20g0357 321 SMART brlzneu 174 239 IPR004827 GO:0003700|GO:0006355
Lal20g0357 321 MobiDBLite consensus disorder prediction 281 321 - -
Lal20g0357 321 Gene3D - 178 281 - -
Lal20g0357 321 CDD bZIP_plant_RF2 179 230 IPR044759 GO:0003700|GO:0006355
Lal20g0357 321 MobiDBLite consensus disorder prediction 102 128 - -
Lal20g0357 321 PANTHER BASIC LEUCINE ZIPPER 34 1 298 - -
Lal20g0357 321 SUPERFAMILY Leucine zipper domain 181 231 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0357 Lal-Chr20 2872892 2877038 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0357 1 257 bZIP Transcription Factor Family AT3G58120 49.175 3.29e-72 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal20g0357 bZIP_1 6e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0357 - - gmx:100820197 355.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0357 20 2872892 2877038 Lal20g0357 20 2872892 2877038 ECH
Lal20g0357 20 2872892 2877038 Lal11g1452 11 17852772 17855462 LSH