Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0344 ATGGCTGATTTAGAGGGTCTGGTCGAGGCAGCAGGGTCAAGGTTCAGTTCATTGGAGCTTATTGGGCAGGGATCATTCGGTGATGTATATAAAGGGTTTGACAAGGAGCTCAACAGAGAAGTCGCTATCAAAGTGATTGATTTGGAAGAATCTGAGGATGAAATTGATGATATTCAAAAGGAAATTTCTGTTCTTTCACAATGTCGATCTCAATACATTACTGAGTATTATGGTTCCTACCTCAATCAAACTAAACTTTGGATAATAATGGAATACATGGCTGGTGGCTCTGTTGCTGATCTACTCCAATCTGGTCCTCCACTTGATGAAATGTCAATTGCTTGCATTCTGCGTGATTTGCTGCATGCCATTGATTACTTACATGCTGAAGGAAAAATTCATAGAGACATTAAAGCTGCAAACATCTTATTGACTGAGAATGGTGATGTAAAGGTTGCAGATTTTGGTGTTTCTGCACAGCTAACAAGGACTATATCAAGGAGAAAGACATTTGTAGGAACGCCATTCTGGATGGCACCTGAAGTTATTCAGAATTCTGAAGGATATAATGAGAAGGCAGATATCTGGTCTCTAGGGATCACTGTCATTGAGATGGCTAAAGGGGAGCCTCCACTTGCTGATCTCCACCCTATGAGAGTGCTTTTCATCATACCTCGAGAGAATCCTCCTCAGCTAGATGAGCATTTTTCTCGTCCCTTGAAAGAATTTGTCTCGTTGTGTTTGAAGAAGGTTCCTGCTGAGGCAAGTGTTTGTGTTCCAGACACTCTATTTTTTTCATTTTCTTTTTTCGCTTTCTTTCTCTTGCAAATTGACGGAGATAGAAACCATAGGATTCAGAGGCCAAGTGCTAAGGAACTTCTCAAACACCGCTTCATTCGAAATGCTAGGGAGAGCCCAAAGCTTTCTGAAAGAATAAGGGAGCGTCCTAAATACCAAATAAGGGAGGAGGATCAGGAGACACCTAAAAATGTACGGAGAGGGATAGGAGAGGCATCTGATACTATGAAGGTTGCAGGAGATTCAAGAGGTGATCAAACTAATCGACCCAGTGATCAGGGTAAAACCATGAAAAGTTCTGGATGGGACTTCAGCATTGGTGGATCACAGGGTACTGGAACCTTTCGTAGTGTTTCACGGCCACCTCAATTTAGAGATAAGAAACCTGAAGTTTCACATAATCAGCTTACCCAAAGAAAAGCTCCAGAAAGTGGCTATCAAGGGGGGTCAGCCAATAGAAGTGCACTTAATGAATCACTTGAAAGCTCCTTTGGAAAAGATCCTAGAGGTTCCTACCATGATGAACATCTGGCTAATCTTGAAGATGATGAATTGTCTGGATCAGGAACTGTTGTTATTCGATCTCCAAAAGGATCAAGGCCATCGGGGTCTCTTGACCACTCATCCCAGTCTACCAGCAGCCATGCTTCTTTTGAAGATACTTCTACCAGTGGAACTGTTGTTTTTCGTAACCAGCGTGACTATTCTGTTTCTCCAGAGACAACAAGTTCCCGACTGGGACTTCATGAGAGAAATTCAAATAGCTCATTCGAAGACAGTGCTGCAAATCTTGCCGAGGCAAAGGCTGCTATTCAAGGAGGACTAAGGAAAGGCAATGCTCGTGAGAGACTTGCAATGGGGAAAATTAACAATCTACAAGAAAGCAAGAGAGAAATGACAAGCAGCTCTGGTTCTTCGAGATCATCACAAAAGGGCATGTCAAGATCGCATTATTCTAGTGGTGATGAAGAAGGTGCTAAGATAATGTCGTCCTCTGTGCCCTTATCAGCTTTGCTTATTCCTTCACTAAAAGAGGCTATTGCTGATGATCCCGAAGGCTCAATTGTGCAAGCAGTTATAAATTCTCTCATAAACATGGAGAACACAAAGCCTAGATCCTCTGATGTTCTTGTCAGAAAGTTGCTTCAACAGTTGGCAAGTTCAAAGGAAGATTCATTGAAAGACCTTCAAGAATTTGCAGGCCAACTATTCAGCAAGACCAAATCATCTGATATAGACTCGGATAGCCGCATGAAACAACAGAATAAGGAGCTTCATCCAAATAGCAATTTAAGCCCACTTGCCAGATTTCTTCTCTCAAGGTTTATTGAACTTATCATTTTCCTTATGGCAAGGCCAAACCTCAAGGGATCTAAACCCATCTTGAGGAGTGTTACAAGTTACTCTTTTGTGTTTTGTTTTGTCTCTTCATTTATCAATTTATTCTAA 2247 0.4166 MADLEGLVEAAGSRFSSLELIGQGSFGDVYKGFDKELNREVAIKVIDLEESEDEIDDIQKEISVLSQCRSQYITEYYGSYLNQTKLWIIMEYMAGGSVADLLQSGPPLDEMSIACILRDLLHAIDYLHAEGKIHRDIKAANILLTENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNSEGYNEKADIWSLGITVIEMAKGEPPLADLHPMRVLFIIPRENPPQLDEHFSRPLKEFVSLCLKKVPAEASVCVPDTLFFSFSFFAFFLLQIDGDRNHRIQRPSAKELLKHRFIRNARESPKLSERIRERPKYQIREEDQETPKNVRRGIGEASDTMKVAGDSRGDQTNRPSDQGKTMKSSGWDFSIGGSQGTGTFRSVSRPPQFRDKKPEVSHNQLTQRKAPESGYQGGSANRSALNESLESSFGKDPRGSYHDEHLANLEDDELSGSGTVVIRSPKGSRPSGSLDHSSQSTSSHASFEDTSTSGTVVFRNQRDYSVSPETTSSRLGLHERNSNSSFEDSAANLAEAKAAIQGGLRKGNARERLAMGKINNLQESKREMTSSSGSSRSSQKGMSRSHYSSGDEEGAKIMSSSVPLSALLIPSLKEAIADDPEGSIVQAVINSLINMENTKPRSSDVLVRKLLQQLASSKEDSLKDLQEFAGQLFSKTKSSDIDSDSRMKQQNKELHPNSNLSPLARFLLSRFIELIIFLMARPNLKGSKPILRSVTSYSFVFCFVSSFINLF 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0344 748 Gene3D Phosphorylase Kinase; domain 1 3 92 - -
Lal20g0344 748 MobiDBLite consensus disorder prediction 346 385 - -
Lal20g0344 748 MobiDBLite consensus disorder prediction 559 582 - -
Lal20g0344 748 MobiDBLite consensus disorder prediction 401 427 - -
Lal20g0344 748 Gene3D Transferase(Phosphotransferase) domain 1 94 331 - -
Lal20g0344 748 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Lal20g0344 748 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 1 255 - -
Lal20g0344 748 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 285 709 - -
Lal20g0344 748 MobiDBLite consensus disorder prediction 305 525 - -
Lal20g0344 748 SUPERFAMILY Protein kinase-like (PK-like) 12 254 IPR011009 -
Lal20g0344 748 MobiDBLite consensus disorder prediction 458 525 - -
Lal20g0344 748 CDD STKc_MST3_like 13 319 - -
Lal20g0344 748 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 285 709 - -
Lal20g0344 748 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 255 - -
Lal20g0344 748 SMART serkin_6 15 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal20g0344 748 Pfam Protein kinase domain 16 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal20g0344 748 MobiDBLite consensus disorder prediction 305 333 - -
Lal20g0344 748 ProSiteProfiles Protein kinase domain profile. 15 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal20g0344 748 MobiDBLite consensus disorder prediction 433 448 - -
Lal20g0344 748 MobiDBLite consensus disorder prediction 554 592 - -
Lal20g0344 748 Coils Coil 41 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0344 Lal-Chr20 2774865 2784405 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0344 1 709 MAP Kinase Kinase Kinase Kinase AT3G15220 60.694 0.0 797
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Lal20g0344 Pkinase 2.4e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0344 K08838 - gmx:100786501 1016.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0344 20 2774865 2784405 Lal20g0344 20 2774865 2784405 ECH