Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0339 ATGAAGCTTAAGGGACCAATAACCTTTTTCTTAGTTCTCTTTACTCTGCTCTCAAGTTCTCAAGCTTACAAATTCTATGTTGGTGGAAAAGATGGTTGGGTTCTGAACCCTTCTGTGGATTATAGTCAATGGTCTGGAAGAAACAGGTTCCAAGTTAGTGACTCACTAGTTTTTAAGTACAATAAAGGCTCAAACTCAGTGTTGGAGGTGAACAAAGATGATTATGAAAAATGCAACAAGGAGAAGCCTATCAAGAAGTTTGAGAATGGTGACACTGAGTTTCAAATTGAAAGATCTGGTCCTTATTACTTCATTAGTGGGAAAAATGATAATTGTGAAAAGGGTCAGAAACTTACTGTTGTGGTTTTGGCTGTAAGATCTCCACCTCCAAAAAGTCCTTTGCATAGTCCTCCAAATGCTCCTCCACAAGTTCCTTCTACACCTCCAAAAACTCCTTCTCCAAAGGTTCCATCACCTCCACAAGTTCCTGCTCCTGTTTATTATCCTCCCATTGTACCAACTCCACAAAAAGCTCCATCACCATATGTTCCAACACCTCCACAAACACCTTCTCCAAGATATAGTCCTCCCAATACTCCTCCTCCTCCTCCAAAAACACCCTCTCCAAGGTCTCAACCACCCTATGTAACAACACCTCCAAAAACACCCTCTACTCCAAGTTCTCAACCTCCATCTATATCAACACCTCCAACAACTCCTTCTCCTAATTCTCAACCTCCACATGTAACAACACCTCCACAACCCATTTCTCCTATTTCTCAACCTCCATCTATATCAGCTCCTCCAACAACTCCTTCTCCTATAAATCAACCACCCTATATAACAACACCTCCAAAACCTAGTTCTCCTTCTTCTCAACCTCCATCTATATCTGCTCCTCCAACAACTCCTTCTCCTATAAATCAACCACCCTATATAACAACACCTCCAAAACCTAGTTCTCCTTCTTCTCAACCTCCATATATATCAGCTCCTCCAACAACTCCTTCTCCTATAAATCAACCACCCTATATATCAAAACCTCCAAAACCTAGTTCTCCTTCTTCTCAACCTCCATCTATATCAGCTCCTTCTATCTCTCAACCTCCCTATGTCTCAGCACCTCCAAAACCCATTTCTCCTTCTTCTCAACCTCCATATATATCAACATATCCTTCTATTTCTCAACCTCCATATTTTTCACAACCTCCAAACACCCCTTCCCCCATTTCTCAACCTCCCTATACACTAACACCTTTGAATAGCCCATCTCCATTTTCACAATCACCTTACATTGCAACTCCTCCAAAGTCCACTTCCCCTATTTCTCAACCTCCACAAACACCAAGAAGTGGAAGCTTTACACCATCTTATTCACCATCATACTCATACCCCAATTCACCAACAACATCACCATACCCATCACCATATGATAACTCTGAACCTTCACTTTCTCCATCTGAATTGTCTCCTCTAGCATCAACTCCATCAAGTTATGTAGCAGCAACTCCAGCACCATTATCATCATTGAGTCCCGGAGGTTCCATAACGACACCGTCCTCGTCGAATGAAACCGCGCCAACCTCGCCAAACCATACGGCGTCTGCATGGGCTGCAACACCAAGAGGGTTATGGATGTATTCACTTACCATTTTAGTTGGTGCAACTCTCACTACTATTCTTGGGTAG 1689 0.4245 MKLKGPITFFLVLFTLLSSSQAYKFYVGGKDGWVLNPSVDYSQWSGRNRFQVSDSLVFKYNKGSNSVLEVNKDDYEKCNKEKPIKKFENGDTEFQIERSGPYYFISGKNDNCEKGQKLTVVVLAVRSPPPKSPLHSPPNAPPQVPSTPPKTPSPKVPSPPQVPAPVYYPPIVPTPQKAPSPYVPTPPQTPSPRYSPPNTPPPPPKTPSPRSQPPYVTTPPKTPSTPSSQPPSISTPPTTPSPNSQPPHVTTPPQPISPISQPPSISAPPTTPSPINQPPYITTPPKPSSPSSQPPSISAPPTTPSPINQPPYITTPPKPSSPSSQPPYISAPPTTPSPINQPPYISKPPKPSSPSSQPPSISAPSISQPPYVSAPPKPISPSSQPPYISTYPSISQPPYFSQPPNTPSPISQPPYTLTPLNSPSPFSQSPYIATPPKSTSPISQPPQTPRSGSFTPSYSPSYSYPNSPTTSPYPSPYDNSEPSLSPSELSPLASTPSSYVAATPAPLSSLSPGGSITTPSSSNETAPTSPNHTASAWAATPRGLWMYSLTILVGATLTTILG 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0339 562 MobiDBLite consensus disorder prediction 421 466 - -
Lal20g0339 562 MobiDBLite consensus disorder prediction 397 420 - -
Lal20g0339 562 ProSiteProfiles Phytocyanin domain profile. 23 124 IPR003245 GO:0009055
Lal20g0339 562 PANTHER BLUE COPPER PROTEIN 6 203 IPR039391 GO:0009055
Lal20g0339 562 Pfam Plastocyanin-like domain 33 116 IPR003245 GO:0009055
Lal20g0339 562 Gene3D - 21 127 IPR008972 -
Lal20g0339 562 CDD OsENODL1_like 23 123 IPR041846 -
Lal20g0339 562 MobiDBLite consensus disorder prediction 128 534 - -
Lal20g0339 562 MobiDBLite consensus disorder prediction 130 385 - -
Lal20g0339 562 MobiDBLite consensus disorder prediction 473 534 - -
Lal20g0339 562 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 6 203 - -
Lal20g0339 562 PRINTS Proline rich extensin signature 125 141 - -
Lal20g0339 562 PRINTS Proline rich extensin signature 145 157 - -
Lal20g0339 562 PRINTS Proline rich extensin signature 168 189 - -
Lal20g0339 562 PRINTS Proline rich extensin signature 190 206 - -
Lal20g0339 562 SUPERFAMILY Cupredoxins 22 123 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0339 Lal-Chr20 2739347 2741523 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0339 3 160 Phytocyanin Superfamily AT5G53870 50.932 2.05e-50 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0339 - - lang:109334791 317.775
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0339 20 2739347 2741523 Lal20g0339 20 2739347 2741523 ECH