Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0328 ATGGCTGAGGTCACAGAATTGTTTCCATTGGACAACCAAGTTGATGGATTAATGCATATGTATCTCTACATCATAACTTTTGATGTTCCAACATTCATCATTGCTTTTATCATACTCACATCATTCTTCTTCATCTTCTATCAAATTCTCTATGGTTTGTTCTATTGGTTTGTGGGAATGAGGCCAGAATATGAACATGAACATGAACATGAACATGATATAGAACATGGAAGAATAAATCATGTGACTTATGGTTCTACATCTGAGCCATCTCAACATGTTACTATATTTCATGCTCTTGTTCATACAAATTTACAAGCTTGGACAATGGTGGCTTCATTTGAAGGAGTTTTTGATGAGAAAAGAGGTCAAATGCTAAGAGCTTCTAAGAAATTACCTCCATTGGTAAACTATGGAAATCATCATAACCCTATAAGAAGTTGTGGTGAATGTGCTATTTGCTTGGAAAATTTTGAAGCTGGTCAATTCTGTCAAGTTTTTCCTATGTGCAAACACATTTTTCATTCAGATTGCATAGATAATTGGTTGCAGAAGAAATTAACATGTCCAATTTGTCGTAGTTGCATAGATTAA 594 0.3418 MAEVTELFPLDNQVDGLMHMYLYIITFDVPTFIIAFIILTSFFFIFYQILYGLFYWFVGMRPEYEHEHEHEHDIEHGRINHVTYGSTSEPSQHVTIFHALVHTNLQAWTMVASFEGVFDEKRGQMLRASKKLPPLVNYGNHHNPIRSCGECAICLENFEAGQFCQVFPMCKHIFHSDCIDNWLQKKLTCPICRSCID 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0328 197 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 16 196 - -
Lal20g0328 197 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 118 197 IPR013083 -
Lal20g0328 197 CDD RING-H2_PA-TM-RING 150 193 - -
Lal20g0328 197 SUPERFAMILY RING/U-box 150 196 - -
Lal20g0328 197 Pfam Ring finger domain 150 193 IPR001841 -
Lal20g0328 197 PANTHER RING FINGER DOMAIN-CONTAINING 16 196 - -
Lal20g0328 197 ProSiteProfiles Zinc finger RING-type profile. 151 193 IPR001841 -
Lal20g0328 197 SMART ring_2 151 192 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0328 Lal-Chr20 2649551 2650144 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0328 32 194 C3H Transcription Factor Family AT1G53010 30.357 6.28e-18 75.9