Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0308 ATGAAACTTGTAAAGTTGGTTACTTCTGTTATGGTTGTTTTTCCACTTTTGGTTAATGCCTCATTTTCACTGTACAATCCCCTTGATAGTTATCTAATTGCTTGTGGTTCTTCTCAAAACATCACCTTTCAAGGCCAAACTTTTGTTCCTGAATCACAGCATTCTTCACTTGTGTTCCAACCTGGGAATTCTATTGTTGCTACTTCAAATTCTAGTGTTGTTCCATTTCCAATTTATCAATCAGCTAGGATTTTCACCCAGAAAGCTTCTTATACATTTCAAATTGAGCAACAAGGTAGGCACTGGGTTAGGTTATATTTTTTTCCTGTTCCAAACCCTACCCATGATTTGACTTCTACTGCTGTAACTGTTGTTACTGATGATTTTGTTCTCTTGAGTAATTTCAGTTTTAGTAATGGTTCTTCTATGTTTAAGGAGTATGCTATCAATGTTACATCTGATACATTGACTTTGACCTTTATTCCTTCAAATGGTTCAGTAGCCTTTGTCAATGCAATTGAAGTTGTGTCTATGCCAGATGAATTGTTTGTTGATCAGGCAATGACCCTTAACCCATCAGCACCATTCAGTGGCCTTTCTGAATTAGCCTTTGAAACCGTTTATCGCTTAAACATTGGTGGTTCCTTGCTTAATGCCGAAAATGATACCCTGGGAAGGACTTGGGAGAATGATATGAAATACCTTTATGTAAACAGCTCAGTCACTAATGTGTCAGTCAGCCCTTCCACCATTAAGTATCCGGCTGGTGTTACACCCGAGACAGCGCCAAATTCGGTCTATGCCACTGCTGAAGCAATGGGGGATGCAAATGTAGCCTATTCTAATTTCAACATTACTTGGGTCTTTCCTGTGGATCCGAACTTCTCCTATTTTATTAGGGTGCACTTCTGTGATATTATCAGCAAGTCAATGAATTCTTTAGTGTTCAATTTATTCATAAATACTGACATAGCTCACGGAGGCCTTGACCTCTCGTCGATAACTAACGACTTGGCTGTGCCTTACTATCAGGACTTTGTTTCCAATGCTTCAGCTGACTCCAATACTTTGATGGTTAGTGTTGGTCCTGATACAATGGAAGACATCACAAATGCCACTATGAATGGACTAGAGATAATGAAGATCAGCAATTCATTGAAGAGCTTGGATGGGTTTTCTTCGGTTCGAAGTTTCCTTCCTAGTTCACAATCAAACAAGAACAAGGTAGGGATAATAGTTGGCTCTGTTGTTGGGGCTGTAGCTTCCATAGCATTTGTTGGTTTGTGTTATTGTTGCTTGGTGCTGCACAATTCAAAGTCTACTGAACAGGGTCGTCCGTTGCTGTCTTTACCTTCCTTATATGGAAGCTCTCACACCATGTCATGGATGTCAAAAACTTCACATAGGAGTGGAACCTCAAGCTTCATTTCTTTATCTTCAATAAATCTTGGAAGGGTCTTCACTTTCCAAGAAATCCTAGGTGCAAGCAATAAATTTGATGAGAGGCTTCTTCTCGGTGTTGGCGGTTTTGGCAAGGTTTATAAGGGAACGCTTGAAGATGGGACTAATGTAGCTGTTAAAAGGGGGCACCCGGGATCTGAACAAGGTATTTATGAATTCAGAACAGAGATTGAAATGTTATCCAAGCTTCGCCACCGTCATCTTGTGTCTCTCATTGGTTATTGCGACGAGCGGTCAGAAATGATTCTTGTCTATGAATGCATGTCTAATGGACCCCTCAGGAGTCATTTGTATGGAACAGACCTGCCACCTCTATCATGGAAACAACGGCTTGAAATTTGCATCGGAGCAGCGAGAGGCCTTCATTATCTCCACACTGGTGCTTCTCAAAGCATCATTCACCGTGATGTGAAGACAACAAACATCCTTTTAGATGATAACTTTGTCGCTAAAGTTGCTGATTTTGGCCTCTCCAAAACTGGTCCTGCTCTTGATCAGACTCATGTGAGCACCGCTGTTAAAGGTAGTTTCGGTTATCTTGACCCTGAATACTTTAGAATGCAACAACTTACAGATAAGTCAGATGTGTATTCATTTGGAGTAGTTTTAATGGAAGTATTATGCACAAGACCGGCCTTGAATCCTGTTCTACCTAGGGATCAAGTCAACATAGCTGAATGGGCAATGAGATGGCAGAAAAAAGGGATGCTTGATCAAATCATGGATCAAAAGCTGACAGGGAATGTTAATTCCGCTTCTCTTAAGAAATTTGGGGAGACAGCCGAGAAATGCTTGGCCGAATATGGTGTCGATAGGCCATCTATGGGAGATGTCTTGTGGAATCTTGAATATGCTTTGCGGCTACAAGAGACCGCCTCATTAGCACTCACGGAACCTGACAATAACAGCGTAAACCAGATCACTGGAATTCAGTTGACTACTACTCTTCAGAATTTCGACAACGGCCTTGGTATGATTGATGGTGGAAATTCTGCCACAGATGATGATGCCGAAGATGCTGCAACAAGTGCAGTGTTCTCACAGTTAGTAAATCCTTGTGGAAGATGA 2529 0.412 MKLVKLVTSVMVVFPLLVNASFSLYNPLDSYLIACGSSQNITFQGQTFVPESQHSSLVFQPGNSIVATSNSSVVPFPIYQSARIFTQKASYTFQIEQQGRHWVRLYFFPVPNPTHDLTSTAVTVVTDDFVLLSNFSFSNGSSMFKEYAINVTSDTLTLTFIPSNGSVAFVNAIEVVSMPDELFVDQAMTLNPSAPFSGLSELAFETVYRLNIGGSLLNAENDTLGRTWENDMKYLYVNSSVTNVSVSPSTIKYPAGVTPETAPNSVYATAEAMGDANVAYSNFNITWVFPVDPNFSYFIRVHFCDIISKSMNSLVFNLFINTDIAHGGLDLSSITNDLAVPYYQDFVSNASADSNTLMVSVGPDTMEDITNATMNGLEIMKISNSLKSLDGFSSVRSFLPSSQSNKNKVGIIVGSVVGAVASIAFVGLCYCCLVLHNSKSTEQGRPLLSLPSLYGSSHTMSWMSKTSHRSGTSSFISLSSINLGRVFTFQEILGASNKFDERLLLGVGGFGKVYKGTLEDGTNVAVKRGHPGSEQGIYEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYECMSNGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGASQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRMQQLTDKSDVYSFGVVLMEVLCTRPALNPVLPRDQVNIAEWAMRWQKKGMLDQIMDQKLTGNVNSASLKKFGETAEKCLAEYGVDRPSMGDVLWNLEYALRLQETASLALTEPDNNSVNQITGIQLTTTLQNFDNGLGMIDGGNSATDDDAEDAATSAVFSQLVNPCGR 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0308 842 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672|GO:0006468
Lal20g0308 842 Pfam Malectin-like domain 33 382 IPR024788 -
Lal20g0308 842 SMART serkin_6 499 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal20g0308 842 Gene3D Phosphorylase Kinase; domain 1 458 573 - -
Lal20g0308 842 ProSiteProfiles Protein kinase domain profile. 499 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal20g0308 842 Gene3D - 30 179 - -
Lal20g0308 842 Gene3D - 202 384 - -
Lal20g0308 842 Pfam Protein tyrosine and serine/threonine kinase 505 765 IPR001245 GO:0004672|GO:0006468
Lal20g0308 842 PANTHER OS07G0166700 PROTEIN 17 835 IPR045272 GO:0004714|GO:0006468
Lal20g0308 842 Gene3D Transferase(Phosphotransferase) domain 1 575 792 - -
Lal20g0308 842 SUPERFAMILY Protein kinase-like (PK-like) 473 770 IPR011009 -
Lal20g0308 842 ProSitePatterns Protein kinases ATP-binding region signature. 505 527 IPR017441 GO:0005524
Lal20g0308 842 PANTHER RECEPTOR-LIKE PROTEIN KINASE THESEUS 1 17 835 - -
Lal20g0308 842 CDD STKc_IRAK 505 770 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0308 Lal-Chr20 2357232 2359760 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0308 25 787 Receptor kinase-like Gene Family AT2G21480 53.737 0.0 806
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lal20g0308 Malectin_like 6.9e-36 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0308 - - lang:109357111 1331.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0308 20 2357232 2359760 Lal20g0308 20 2357232 2359760 ECH
Lal20g0308 20 2357232 2359760 Lal11g1398 11 17429711 17432726 LSH
Lal20g0308 20 2357232 2359760 Lal1g1652 1 18940947 18943496 LSH