Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0299 ATGATGTTAACAGCTACAAAGAGTTCTCTAGAAGAGATGCTTGATTCCCTTCGCCGGAGGGATGGAGAGAAGCCGAAGGACTTACCACCAGTATTGCCAACTAGGCCGACATCGAAGGCTCGGCTTCCCCGGGCCAGAAGGACATTGCCTGATAATTTAAAGGTTGATGATGTGAATATTAAGGGGCACAGGCGGAAAGGTAGTTTTGGGAACAAGAAGATGAAGATGGATGTGGAATCACCTTATATTGTCAAATCAGAAGAAAAAACAATGAGTGAAGAATTACCACAAGGTCCAGTTCCAAAATCTGTTGATTCTACTGCTTCAGTAACTCCTCCGCCAGGGGAATTGGAAGATGACAATGTTGCTTATTACATCAAAAAGAAACTTAATGTTTGGTGTCGGCAACCAAAAGGGAAGTGGGAACGAGGAACGATACAGTCAACTTCAGGAGAAAAAGCATCTGTTTCACTCTTAAATGGAAATGTTATGAAAGTTTCCAGATTAGAGCTCCTACCAGCTAATCCTGATATTTTAGAGGGTGTAGATGATCTTATACAGCTTAGTTATTTAAACGAGCCCTCCGTTCTTCACAATCTTCAGTTTCGATATTCTCAAGATATAATTTATAGTAAAGCCGGGCCAATTTTAATTGCACTCAATCCCTTCAAAGATGTTCGTGTTTATGGAAATGATTTACTCTCAGCTTATAGGCAGAGACTTATAGATAGTCCTCATGTCTATGCTATGGCAGATGCAGCTTATAATGAGATGATACGAGATGAAGTAAATCAGTCCATTATCATAAGTGGTGAGAGTGGAGCTGGGAAGACAGAAACAGCAAAAATTGCTATGCAATACTTAGCTGCTCTTGGTGGTGGCAGTTGTGGGATTGAAAATGAAGTTCTTCAAACAAATTTTATATTAGAAGCTTTTGGAAATGCAAAAACGTCTAGGAATGACAACTCTAGCAGATTTTCAAGAGTTGTTCAACTGGCCAATGGTGAGAGGTCTTATCACATATTTTATCAACTATGTGCTGGATCTTCACCCGATCTTAAAGAGAGATTGAATCTTAGAGTGGCCGGTGAATATAAATATCTTAATCAGAGTGACTGCATGACAATTGATGGTGTTGACGATGCTAAAAACTTTCACCGGCTGATGGAAGCGTTGGATGTTGTTCGAATGAGCAAAGAGGATCAAGAACTTGTTTTCAAGTTGCTTGCTGCAATATTATGGCTGGGAAATATCTCATTCAACGTTGCTGACAATGAAAATCACATTGAAGTGGTGAAGGATGAAGCTGTAACCACTGCTGCGTTGCTGATGGGCTGCAGTTCCGAGGAGTTAATGACAGCATTATCTACCCGTAAAATCCAAGCTGGCAAGGATACTATTGCCAAAATGTTGACACTGCGGCAGGCCATTGATACGAGAGATGCATTAGCAAAATTTATCTATGCAAGCTTGTTTGATTGGCTTGTAGAACAAGTTAACAAGTCCCTTGAAGTGGGTAAACAACGTACTGGGAGATCCATTAGTATCCTTGATATTTATGGGTTTGAGTCATTCCAGAAAAATAGCTTTGAACAGTTTTGCATAAATTATGCCAATGAGAGGCTTCAACAACATTTCAACCGGCATCTATTTAAACTTGAGCAGGAGGACTACGAATTAGATGGCGTTGATTGGACCAAAGTAGAATTTGATGACAATCAAGAGTGTCTGGATCTCTTTGAGAAGAAACCTCTAGGGCTACTCTCTTTGTTGGATGAGGAATCAAATTTTCCGAGGGCCAGTGATCTAACACTTGCCAACAAACTTAAGCAGCATCTGAATGCTAATCCTTGCTTTAAAGAGGAAATGGGCAGGGCTTTCAGTGTTCGTCATTACGCCGGAGAGGTTTTGTATGATACGAACGGCTTTCTAGAAAAGAACAGAGATCCACTTCCTTCTGATTCCATTCAACTGCTATCCTCATGTACTTGTGAACTGCTTCAGTTGTTCTCCAAAACACTTAACCACTCTCAGAAGCAATCAAATTCCTTCCATGCAGGTTCTCTGGACTCGAAAAAGCAGAGTGTTGGCACAAAGTTCAAGGGTCAATTGTTTAAGTTGATGAATCAGTTGGAGAGCACGACACCACACTTTATTCGCTGTATAAAGCCAAATACTAAGCAACTTCCTGGCATATATGATGAAGATCTTGTTCTTCAACAGCTTAAATGTTGTGGAGTTTTGGAGGTTGTTAGGATTTCAAGGGCCGGATATCCTTCTCGAATGACGCATCAAGAGTTTGCCAGAGGGTATGGTTTTCTTCTTTCTGAGGTCAACACATCTCAGGATCCGTTGAGCATCTCAGTTTCTGTTTTGCAACAATTTAATATTCCTCCTGAAATGTACCAAGTTGGCTTCACCAAACTGTATCTTCGAACCGGGCAGATTGGTATGCTGGAGGACAAAAGAAAACAGTTTTTGTGCGGAATTGTTGGGATTCAGAAATGCTTTCGTGGTCATCAAGCTCGCAGTTGTTACCATGAACTTAAGAATGGAGTGAAAACTATACAATCATTTATTCGTGGAGAAATTGATAGAAGAAATTATGGTGTTATGGTGAAGTCTTCTATAACTATTTATTCTGAAAAAGTTGAGGAGATTCATGCAGTCATAGTACTACAATCTGTAATCCGTGGCTGGATGGTTCGAAGGCATATTAAAGGCACAGATAGGTGTAAGATATATCCTGAAAATGCAAGACCTAGGCGTAAATCACGTTCAAAGATTCCAGAAGTGAAGCCGGATGTGGCACAGAACCTGCCTTCAGCTGTAGCAGAACTCCAAAGGCGGGTTATCAAGGCTGAAGCGACTATACAGCAAAAGGAAGGAGAAAATGGCGAGTTAAGGGAACAACTAAAACAATTTGAGAGAAGGTGGATTGAATATGAGACAAAGATGACATCAATGGAGGAAATGTGGCAAAAACAGATGGTGTCTTTGCAAATGAGCCTTACTGCTGCTAAAAAGAGCCTTGCTTCTGATAATGGCAGTAGTCACCCGACACGACACGATGCTGAGTCACCTTCATGGTATGATTCTGAAGATGGTACTTCCCTAGGATCGCGAACACCGGGCCTGAGCACACCAATGAAGTATTCTACTAGTCCTTCAGTTGGAGCGTGGAGGCAGTCTAATGTTTCTTTGCATTCTTCCTTAAGTAATCTAGTGAAGGAATTTGAGCAGCGGAGACATACGTTTGATATCGACGCAAGATCGCTGGTTGATATTAGACCAGAACAAATCGGTAGAACGAATCCCATTGAAGAATATCGGAAACTTAAGCATAGGTTTGAGGCGTGGAAGAAAGAATACAAGGTTAGATTAAGGATGGCAAAAGCAACACTTCATAAAATAGGGAACTCGGAAGTGGAAAAAAGTTGGAGGACATGGTGGGAAAAAATAAGTTCAAGAGCACTATAG 3480 0.4095 MMLTATKSSLEEMLDSLRRRDGEKPKDLPPVLPTRPTSKARLPRARRTLPDNLKVDDVNIKGHRRKGSFGNKKMKMDVESPYIVKSEEKTMSEELPQGPVPKSVDSTASVTPPPGELEDDNVAYYIKKKLNVWCRQPKGKWERGTIQSTSGEKASVSLLNGNVMKVSRLELLPANPDILEGVDDLIQLSYLNEPSVLHNLQFRYSQDIIYSKAGPILIALNPFKDVRVYGNDLLSAYRQRLIDSPHVYAMADAAYNEMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGGSCGIENEVLQTNFILEAFGNAKTSRNDNSSRFSRVVQLANGERSYHIFYQLCAGSSPDLKERLNLRVAGEYKYLNQSDCMTIDGVDDAKNFHRLMEALDVVRMSKEDQELVFKLLAAILWLGNISFNVADNENHIEVVKDEAVTTAALLMGCSSEELMTALSTRKIQAGKDTIAKMLTLRQAIDTRDALAKFIYASLFDWLVEQVNKSLEVGKQRTGRSISILDIYGFESFQKNSFEQFCINYANERLQQHFNRHLFKLEQEDYELDGVDWTKVEFDDNQECLDLFEKKPLGLLSLLDEESNFPRASDLTLANKLKQHLNANPCFKEEMGRAFSVRHYAGEVLYDTNGFLEKNRDPLPSDSIQLLSSCTCELLQLFSKTLNHSQKQSNSFHAGSLDSKKQSVGTKFKGQLFKLMNQLESTTPHFIRCIKPNTKQLPGIYDEDLVLQQLKCCGVLEVVRISRAGYPSRMTHQEFARGYGFLLSEVNTSQDPLSISVSVLQQFNIPPEMYQVGFTKLYLRTGQIGMLEDKRKQFLCGIVGIQKCFRGHQARSCYHELKNGVKTIQSFIRGEIDRRNYGVMVKSSITIYSEKVEEIHAVIVLQSVIRGWMVRRHIKGTDRCKIYPENARPRRKSRSKIPEVKPDVAQNLPSAVAELQRRVIKAEATIQQKEGENGELREQLKQFERRWIEYETKMTSMEEMWQKQMVSLQMSLTAAKKSLASDNGSSHPTRHDAESPSWYDSEDGTSLGSRTPGLSTPMKYSTSPSVGAWRQSNVSLHSSLSNLVKEFEQRRHTFDIDARSLVDIRPEQIGRTNPIEEYRKLKHRFEAWKKEYKVRLRMAKATLHKIGNSEVEKSWRTWWEKISSRAL 1159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0299 1159 Coils Coil 944 985 - -
Lal20g0299 1159 CDD MYSc_Myo8 194 812 IPR036022 -
Lal20g0299 1159 ProSiteProfiles IQ motif profile. 886 913 IPR000048 GO:0005515
Lal20g0299 1159 MobiDBLite consensus disorder prediction 12 28 - -
Lal20g0299 1159 PRINTS Myosin heavy chain signature 210 229 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal20g0299 1159 PRINTS Myosin heavy chain signature 264 289 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal20g0299 1159 PRINTS Myosin heavy chain signature 307 334 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal20g0299 1159 PRINTS Myosin heavy chain signature 513 541 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal20g0299 1159 PRINTS Myosin heavy chain signature 566 594 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal20g0299 1159 Gene3D Kinesin motor domain 145 332 IPR036961 -
Lal20g0299 1159 Pfam IQ calmodulin-binding motif 830 847 IPR000048 GO:0005515
Lal20g0299 1159 Pfam IQ calmodulin-binding motif 888 907 IPR000048 GO:0005515
Lal20g0299 1159 Gene3D - 337 395 - -
Lal20g0299 1159 PANTHER MYOSIN 112 326 - -
Lal20g0299 1159 PANTHER MYOSIN 327 1157 - -
Lal20g0299 1159 SMART MYSc_2a 174 825 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal20g0299 1159 MobiDBLite consensus disorder prediction 88 115 - -
Lal20g0299 1159 ProSiteProfiles Myosin motor domain profile. 180 824 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal20g0299 1159 Pfam Myosin head (motor domain) 327 812 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal20g0299 1159 Pfam Myosin head (motor domain) 182 326 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal20g0299 1159 Gene3D Myosin VI head, motor domain, U50 subdomain 398 529 - -
Lal20g0299 1159 SMART iq_5 848 870 IPR000048 GO:0005515
Lal20g0299 1159 SMART iq_5 825 847 IPR000048 GO:0005515
Lal20g0299 1159 SMART iq_5 885 907 IPR000048 GO:0005515
Lal20g0299 1159 ProSiteProfiles IQ motif profile. 849 878 IPR000048 GO:0005515
Lal20g0299 1159 ProSiteProfiles IQ motif profile. 829 855 IPR000048 GO:0005515
Lal20g0299 1159 PANTHER MYOSIN-2 ISOFORM X1 327 1157 - -
Lal20g0299 1159 PANTHER MYOSIN-2 ISOFORM X1 112 326 - -
Lal20g0299 1159 Gene3D - 830 876 - -
Lal20g0299 1159 Gene3D - 758 825 - -
Lal20g0299 1159 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 127 176 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lal20g0299 1159 Gene3D Kinesin motor domain 678 757 IPR036961 -
Lal20g0299 1159 MobiDBLite consensus disorder prediction 1009 1051 - -
Lal20g0299 1159 MobiDBLite consensus disorder prediction 1 53 - -
Lal20g0299 1159 MobiDBLite consensus disorder prediction 1031 1051 - -
Lal20g0299 1159 Gene3D - 530 673 - -
Lal20g0299 1159 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 132 905 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0299 Lal-Chr20 2291633 2302649 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0299 1 1153 Myosins gene family AT5G54280 59.058 0.0 1431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0299 K10357 - gmx:100819335 1801.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0299 20 2291633 2302649 Lal20g0299 20 2291633 2302649 ECH