Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0296 TTTTTCTCCATGGCCACTTCACTTCTCTTCAAGGCCTTATCTGACCAAAACAGTAACCATGATGGTGATCAAAACATGAAAATGAAACCCCTTTGTGAAGACACAAAGGGTCATGAAGTTGGAAGAAGCAGTGGTAGAGGAAGAAAAACTCAAGGGAAAGGTCCAAAGAAACAACCTCAAAGAGGGTTAGGTGTGGAACAGTTAGAACGTCTTAGGATGCAAGAATCATTGATGAAGATGAATGAAACATGTTCTGGATTTCCAGTTATTCCAAATTTCCCTGATCATCATCATCATCATCATCATCACCTTCCAGTGTTTCCTTCCTTCACTAGTGTCCAAGACCCCTTTAATAGCAGCACTAGTAGTAGTGTTCCAGTGAGGTATGGTGCACCAAACCATGTCCAAGGTGTGATTCAGTGTTCCCCTCAACAAGTTCTTAATGGAAATAGTATTGGTGTATGGGATCAGAATGGTCCTTTCATAGGAAATAATAGGGTTGGTGTTAGTTCTGGTATTTGTGGAGTGGGATTTGTGGTGCCTAATCAACTTAATAGGGTGAGTTCTTATGGATTTGGGGTTCCAACTTTGAGTCCTAATTTGGTTGGAAGCCCTTTGGAGACATCCAAAGAGCTCTCTTCAATGCCAAATGTGCATTTTGCTGAACCTCAATGTTTTGATGTTTGCCTCAACAAGAAATCACGTTTCAATGAGGTCAGTGTAAAAGGATCATATGCAAGAAGAGACATGACTTTTGAGATATGGCCAAATTGCAATAGCCCTGAATTTCTTGGACTTATTCCTCAAGCTTCTGCCCCAAATCTTGTTGAGGAAACCAGTAATTTCTATAACAAACATGACAGGAATGATGTTGCTTCTGCTACAAATATTGATGAGAGTGTGGAGATTGTTGCAGTTCACAGGAAGGGAAACTCAAGAGTTTTCATGGAATATGAGTTTTTCCCAGGAAAAGATGACTTAGGCACTACTTCCAAGGTTCTGGAATTAGCCACAAATATAGGTGCTGCTGAAGCTTCTCCTATTACTACTGCACCCTATGGAGATTCTGCTTCTAATGTTGATTTATCTCTGAAGCTTTCCAACTAG 1107 0.4047 FFSMATSLLFKALSDQNSNHDGDQNMKMKPLCEDTKGHEVGRSSGRGRKTQGKGPKKQPQRGLGVEQLERLRMQESLMKMNETCSGFPVIPNFPDHHHHHHHHLPVFPSFTSVQDPFNSSTSSSVPVRYGAPNHVQGVIQCSPQQVLNGNSIGVWDQNGPFIGNNRVGVSSGICGVGFVVPNQLNRVSSYGFGVPTLSPNLVGSPLETSKELSSMPNVHFAEPQCFDVCLNKKSRFNEVSVKGSYARRDMTFEIWPNCNSPEFLGLIPQASAPNLVEETSNFYNKHDRNDVASATNIDESVEIVAVHRKGNSRVFMEYEFFPGKDDLGTTSKVLELATNIGAAEASPITTAPYGDSASNVDLSLKLSN 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0296 368 MobiDBLite consensus disorder prediction 15 66 - -
Lal20g0296 368 PANTHER PROTEIN SPOROCYTELESS 4 367 IPR014855 GO:0003700
Lal20g0296 368 MobiDBLite consensus disorder prediction 26 46 - -
Lal20g0296 368 PANTHER OS01G0212500 PROTEIN 4 367 IPR040356 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0296 Lal-Chr20 2248179 2250290 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NOZZLE Lal20g0296 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0296 - - lang:109348179 656.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0296 20 2248179 2250290 Lal11g1392 11 17372085 17374163 LSH