Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0292 ATGTTGCCCCGTGGACCCCTCCCATACACTCTAGTGCAAAATCTTATAGAACGATGTCTGCAGCTATATATGAGCCAGGCAGAAGTTGTGGAAACGCTACTGAATCAAGCAAAAATAGAGCCTGGTTTCACTGAACTGGTTTGGCAAAAGCTTGAAGAAGAAAACCAAGAGTTCTTCAGGGCTTATTACTTAAGATTGATGGTGAAGCAGCAAATACAGGAGTTCAACAGGTTGCTAGAACAACAAGTGCAATTAATGCATCTACACCCAACTGCAGTTTCATCACTACCTAACTCTAATGGGTCACATATCCCCGCAGTTGCATCATTACCTAACTCTAACGGTTCACATATCCCCACAGTTGCATCATTACCCACTTCTAATGGGTCACATATCTCTGCAATTTCATCACTACCTAACTCTAATGGCTCATATGTCCCTGCAGGCAAGTCACGTATTCTTGCAGTTCCATCATTACCCACCTCCAATGGGTCACAGTTGTCTGCATTTTCATCACAATCTAACTCTAATGGGTCACATGCCCCTGCAGTACCTCAGAATCAGGCATACTACGCTGCTGAGCGAACCCGAGGAGGATTGAAGCCAGAAAGTATGCAACATCCTGTTGGTTCCAGTTTATCTAATGTGTTTAATAATGGTCAGTCATCACTACATGCAACTATGCATGCTGCCATTGATATGTCTGCTCATGGAAGTAGGGTTAATGGTCTTCCAAACATGCTTTCAGCTCAAAGCTCAAACATGGGTCTGATACAAGGTATAAATAGGGGAATGATCAAAACAGAACCCGGATACTCAGGTTGTTCTCCTTATATGTTTGGTGCTGAAGGAAACGTCCTTGAGGCACGCCCAACTATTGGTGATGCTTCAGTCACAACATTCACTAATGCGGAGTCCAACTCACATTCTATGAACGAGGCAGTCCTGGATCCAGACACTTCTTCATTTGGATTTTTGGGGCAGATTCCTAGAAATTTTAGCCTTTCAGATCTGACTGCTGACTTTTCTCAGAGTTCTGTTTCTTATGCAGCAGACATACTGGAGAGCTATTCTAGGTCACCCTTCCTAGCTACTGATAATGGTAACTTCCTTGAGAGAGGAGAACAGGACAATAATAGGCTGGATTCCATATCAGAAGGGTTGAGCTATGAAGACTTTGGGAGTGATAGTTGA 1194 0.4347 MLPRGPLPYTLVQNLIERCLQLYMSQAEVVETLLNQAKIEPGFTELVWQKLEEENQEFFRAYYLRLMVKQQIQEFNRLLEQQVQLMHLHPTAVSSLPNSNGSHIPAVASLPNSNGSHIPTVASLPTSNGSHISAISSLPNSNGSYVPAGKSRILAVPSLPTSNGSQLSAFSSQSNSNGSHAPAVPQNQAYYAAERTRGGLKPESMQHPVGSSLSNVFNNGQSSLHATMHAAIDMSAHGSRVNGLPNMLSAQSSNMGLIQGINRGMIKTEPGYSGCSPYMFGAEGNVLEARPTIGDASVTTFTNAESNSHSMNEAVLDPDTSSFGFLGQIPRNFSLSDLTADFSQSSVSYAADILESYSRSPFLATDNGNFLERGEQDNNRLDSISEGLSYEDFGSDS 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0292 397 MobiDBLite consensus disorder prediction 164 184 - -
Lal20g0292 397 Pfam Plant protein 1589 of unknown function (A_thal_3526) 12 63 IPR006476 -
Lal20g0292 397 MobiDBLite consensus disorder prediction 164 185 - -
Lal20g0292 397 PANTHER OS02G0137100 PROTEIN 11 390 IPR006476 -
Lal20g0292 397 PANTHER OS02G0137100 PROTEIN 11 390 - -
Lal20g0292 397 TIGRFAM A_thal_3526: uncharacterized plant-specific domain TIGR01589 11 65 IPR006476 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0292 Lal-Chr20 2214355 2224046 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0292 - - lang:109348185 696.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0292 20 2214355 2224046 Lal12g0471 12 3370397 3375025 ECH
Lal20g0292 20 2214355 2224046 Lal20g0292 20 2214355 2224046 ECH
Lal1g1669 1 19128968 19136809 Lal20g0292 20 2214355 2224046 LSH