Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0283 ATGATAAATCAGAAGGTTGTACTTGAAACTGAAGCCAAGTTCAGCAATAATCATGCTAAATCTGAGAGTGTAGAAGGCAAGAAGAAACTGAAGAAAGTGAGATCAATAAGGCTAGTAAGGTGTAAAAGCATGAAATCATTCATTAGAGAAAATAAGAATCTTTCTATATCAGATGCATCACATAATTATATGAAGGGTACTAGTAGTTCTCATGCAAAGGAGAGTTTTCAGGTTACAGAAACACTTTCCACAAAGAAGAGTTTAACAAGAGTGTATACTTTGAAACTAAAGAAAAATGTGACTAGAAAGAGTGAAATGAAGAAGAAACTAAAGTCTTCAAGATCAATAAGATCTGAATCTGAGACACAATCAAACTATGTTGGTAACAAATCCCAGAGAGTTATGAGTAGAAGATTGAGCTTGAAGCCTGTGAGGTTCTTAGCAAAAATGCCTACTTTTAAGTCAAAGAATGAATCAGTTTTGCAAAAAGCTACTTGCTCTTCAATTATCAAGGATTCTGATTTCCCTGATCATATTGAGGAAAGTGGTTGTGAAGGAGTACCATCTATTAAGATTTGTCCATATACTTATTGTTCTCTTCATGGTCATCGCCGCGGTGATTTGCCTCCACTTAAGCGCTTTGTTTCGATGAGGAGGCGTCAGTTGAAGACATACAGGAGTACCAAAATGGATGATTGTGATACATCTGTTACTAGATTGAAGCAGATCGGTAATTCGAGGAAAGCCACTCAGCATTGTCGAACCATCCCGAATGCAAAAAAGCTGGCAAGCGACTCGTGTGTTAGGCCTAATGGTAATCTGAAGATTGCAGTTACTGAAGGTGGCACTTCTGTGGGAGAGGATGAAGAAATGCACAAGTCTAGTTGTGATACCGAGGTGTTACTCGGCGATTCCTCATTTCCGCATATGACTAACTTTGAGCAGGATCTCGGTAATTCTCTGGCTGTAAAAGGCTACATTTCACCTGCTATCAAAGACACAAATATGAAAAATTGCTGCATTGCCACTGAAAAAGATAAATCCGATTCCGAGGTCACTGATTCGGCGAATGACAAGAATATAGCTGCTAGCAAGAAAAATGATGAAAGTGCTATTGTGGAATCAACATCAATAGATCTTCTCAAGTCTTCTGCTTCTGATATCAAGATATTGGAGGAAGAGGCAACTACCAAAGGCTATGAAGTAACAATGCAGACGAGTTCTGCGCCGAAGGAGCCTAAGCCTCTTTGCGATACTGATGTGACATACAAGACACAAGAAAGAGATCAGAAATATATAAAGAAGTGGCACTTGATGTATAAGCATGCAATATTAAGTATCACAGGGAAAGAAAATCACAAGCTTCCTTTAAATGGAAGGGACAATGAAGGAAGAGTGCAAGATTCTCACACACTTAATGTAGGAAACAGATCTTCTTGTCAGGATTATTGTGAAACAGATCAGGATGTGGATCATGAAAATGAGAATGTAATTGATCAGATGCAGAAAGCATTTGATGAAATTCTTCTTCAAGAACCTGAAGACCTCTTTTATGATGATGATTCCAAATCTAGAGGCATCGGTTTCGATGAGGTATTCTTAGAAAAGAGTGAAGGTAATGAAGGGAAACTATACACCCCAGCATCCATTGAATCTCCTAAAGAAGAAACATGGCCAAAAGTTGACAATTTCAGAAGTCATGTTGAAGAAATAACAGCACAGAAGATAGGAGCCAAAGCTGAGCAAAAAACACCAAAAAGATGGAGCAATCTGAAAAAGTTAATCCTCTTGAAAAGGTTTGTGAAGGCATTAGAGAAGGTTAGAAACTTCAACCTACAAAGACCGAGGAATTTGCCTTCAGATGCTAACTTTGAAGCAGAGAAAGTATTTCTCAAGCACCAAACAGGAGAGGAGAAAAAGAATGCTGAGGAATGGATGCTTGACTATGCACTTCGAACGGTTATTTCTAGACTTGAACCTGCTCAAAGACGAAAAGTGGCACTTCTAGCAGAAGCTTTTGAAACAATTCTGCCATTTCAAGATGCTGAAAATGGCCTGCAGTCATTCGGAACACGGGAAACTCGAGCAAGTCCAACTCAACCGCTGGACGATTCCTCGTATGATAGCAAGGAAGAAACAGACAATGGAAAGGATTGTGGCTATTCTGCTAATATATTGCTTGGAAAAGCATTATCTCCTCATAATAGTGTTATGGGATTTGCAGATAGTACTAGTGATGATCCAATGCCTGAACTGCACGATCCTATGGTGTTTAAAGAAAGATGTGTTGACAATCCTGAGCCCAAAACAGTCAAGAATATTCCTGTATCTGGAGCCGTTGATGAAGATTTGATCGGAAAGCAAAGTTTAACCAGAAATTATGACAATGGAGAGAAGATCTCAAGTGACAATGATAACATTCATCTAGCAGAGGAGGCTACAACCAGTGAAATAGTCGATGAAGTCTCGGATGGTTTGGAATCAACTTCGAATACAGAAATTCCAAATAGGAAACCTGAGTCACCTGAAAGTGTAATACTAAGAGGTCTTCCCAAATTGCTCAGATCAAATTCCGTTGGTTCAGGAGCACCTTCCGATCAATTAGACGAAGCAGCAGCAGACAGAAAAGATAGGATTGAAAAGGCTAGGCCGGAAACTGGGACACTAGAAGGGTTTGCTACACTTAGCAAATCAAAAGCTCCTAAGAGTGCAGATGTTGCAGAACCTGAGACCGATATAGCGAAACACAAGTTGTGGTACATGGTTTATAAGCACATGGTATCAGATACTGCAGAAGATGATACCAAGATGCTAGTTGATGGGGCAGAGGAGAAAGAATCGGGGAACGAAGGCGGTAGAATAAGAGGAACTTCTGTCTCTTATGATAGTACGCCTGCGGTGAATGAAGATCTGCGATCCCAAGGTCATGGTGTAGCTAACCCGGAAGTTGAACAACAGCAACTTGAAGCCATCAAGATGGTAGAAGAAGCGATTGATTCAATCACTTCCGATGTTCAGGACGACTTACCAGACAGACAGGCACTTGATGACAACACAATTTCCGACGACTGCTCCAAACAATCCAACAGAAGTGAAAGAGTGTACAGCGAAGGCCTGAACCAAAAAGAAGAAAATACGGAATTAGAACACGAAATAACCGAAGAACAAGAAGAGACAGCACCGAAGGAGGGAAACAAATCAAACCAACAGTTGACTAAAAGCTGGAGCAATCTTAGAAAAGTGATCCTGCTAAGGAGATTCATCAAGGCATTGGAAAAAGTAAGGAAATTCAATCCAAGAGGACCAAGATACCTACCGATAGAACCTGATTCAGAAGGTGAAAAGGTTAACTTAAGGCATCAAGACATGTTAGAGAGAAAAGGGACAGAAGAATGGATGCTTGATTACGCACTTCAACGCGTTGTTTCGAGATTAACTCCAGAAAGAAAAAGAAAAGTGGGGCTGCTAGTGGAAGCTTTTGAAACAGTCATGCCAACCTTTAAACACTGA 3510 0.4014 MINQKVVLETEAKFSNNHAKSESVEGKKKLKKVRSIRLVRCKSMKSFIRENKNLSISDASHNYMKGTSSSHAKESFQVTETLSTKKSLTRVYTLKLKKNVTRKSEMKKKLKSSRSIRSESETQSNYVGNKSQRVMSRRLSLKPVRFLAKMPTFKSKNESVLQKATCSSIIKDSDFPDHIEESGCEGVPSIKICPYTYCSLHGHRRGDLPPLKRFVSMRRRQLKTYRSTKMDDCDTSVTRLKQIGNSRKATQHCRTIPNAKKLASDSCVRPNGNLKIAVTEGGTSVGEDEEMHKSSCDTEVLLGDSSFPHMTNFEQDLGNSLAVKGYISPAIKDTNMKNCCIATEKDKSDSEVTDSANDKNIAASKKNDESAIVESTSIDLLKSSASDIKILEEEATTKGYEVTMQTSSAPKEPKPLCDTDVTYKTQERDQKYIKKWHLMYKHAILSITGKENHKLPLNGRDNEGRVQDSHTLNVGNRSSCQDYCETDQDVDHENENVIDQMQKAFDEILLQEPEDLFYDDDSKSRGIGFDEVFLEKSEGNEGKLYTPASIESPKEETWPKVDNFRSHVEEITAQKIGAKAEQKTPKRWSNLKKLILLKRFVKALEKVRNFNLQRPRNLPSDANFEAEKVFLKHQTGEEKKNAEEWMLDYALRTVISRLEPAQRRKVALLAEAFETILPFQDAENGLQSFGTRETRASPTQPLDDSSYDSKEETDNGKDCGYSANILLGKALSPHNSVMGFADSTSDDPMPELHDPMVFKERCVDNPEPKTVKNIPVSGAVDEDLIGKQSLTRNYDNGEKISSDNDNIHLAEEATTSEIVDEVSDGLESTSNTEIPNRKPESPESVILRGLPKLLRSNSVGSGAPSDQLDEAAADRKDRIEKARPETGTLEGFATLSKSKAPKSADVAEPETDIAKHKLWYMVYKHMVSDTAEDDTKMLVDGAEEKESGNEGGRIRGTSVSYDSTPAVNEDLRSQGHGVANPEVEQQQLEAIKMVEEAIDSITSDVQDDLPDRQALDDNTISDDCSKQSNRSERVYSEGLNQKEENTELEHEITEEQEETAPKEGNKSNQQLTKSWSNLRKVILLRRFIKALEKVRKFNPRGPRYLPIEPDSEGEKVNLRHQDMLERKGTEEWMLDYALQRVVSRLTPERKRKVGLLVEAFETVMPTFKH 1169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0283 1169 MobiDBLite consensus disorder prediction 880 908 - -
Lal20g0283 1169 MobiDBLite consensus disorder prediction 1026 1062 - -
Lal20g0283 1169 MobiDBLite consensus disorder prediction 689 704 - -
Lal20g0283 1169 Pfam Plant calmodulin-binding domain 1062 1165 IPR012417 GO:0005516
Lal20g0283 1169 Pfam Plant calmodulin-binding domain 579 678 IPR012417 GO:0005516
Lal20g0283 1169 MobiDBLite consensus disorder prediction 824 838 - -
Lal20g0283 1169 MobiDBLite consensus disorder prediction 856 875 - -
Lal20g0283 1169 MobiDBLite consensus disorder prediction 117 134 - -
Lal20g0283 1169 MobiDBLite consensus disorder prediction 103 134 - -
Lal20g0283 1169 MobiDBLite consensus disorder prediction 1003 1071 - -
Lal20g0283 1169 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 14 1166 IPR044681 GO:0005516
Lal20g0283 1169 MobiDBLite consensus disorder prediction 943 964 - -
Lal20g0283 1169 Coils Coil 1036 1058 - -
Lal20g0283 1169 MobiDBLite consensus disorder prediction 689 715 - -
Lal20g0283 1169 PANTHER CALMODULIN BINDING PROTEIN PICBP 14 1166 - -
Lal20g0283 1169 MobiDBLite consensus disorder prediction 824 844 - -
Lal20g0283 1169 SMART CaM_binding_2 564 678 IPR012417 GO:0005516
Lal20g0283 1169 SMART CaM_binding_2 1046 1165 IPR012417 GO:0005516
Lal20g0283 1169 MobiDBLite consensus disorder prediction 1005 1019 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0283 Lal-Chr20 2102466 2107137 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0283 570 685 Calmodulin-binding Proteins AT5G04020 48.276 7.02e-24 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0283 - - aprc:113861458 1160.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0283 20 2102466 2107137 Lal20g0283 20 2102466 2107137 ECH