Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0251 ATGTTACCTTTGCTGCTGTGTATTTTTATTGGCGTTTTGATACATCCCGTTGTGGCAGCAGTGATACCGTTGGGTTCCAAACTTTCTGTGTTGGACAATGATTATTGGGTTTCCTCCAATGGTGATTTTGTAATTGGATTCTTTAACACTTCAGATGAACCTAACCAGTATAGTGTTGGCATTCGTTTTAATCCGAAATCTATACCGCATAGCCAACAAAAAGTGGTTTGGGTTGCAGGAGCCCATGTCACAGTTAGTAACATGTCCTATTTCCAACTCACCTTGGATGGAGAACTAGTCCTGTTTGATTCATTACAACGAGTCACGACATGGACCAGTGGAACGGGCAACCGGTCGGCTGTATCAGCTGCTCTTCATGATAATGGCAATTTTGTTCTGATAGATACAGAGCAAAACATCATTTGGCAAAGTTTTGATACTCTATCTGATACATTACTCCCAGGACAGACATTTTCTGCATATCAACTACTTCGTCCTGCATCGAAGAATCCCATCTCCAGCTACTACAGTCTTTACATGAATGCTTCGGGTTATTTGCAGCTTCGCTGGAAGAGTAATATTACCTACTGGGTCAGTAAAAGCCCTCCTGCTTCAAATCTCACTGCCGTTCTTACCACCAGTGGAGCTTTGCAACTTGTAGACCAAAGTTTCAAACCTGTCTGGAGTGTGTTTGGAGAAGACCACAATGATTCTGTAAATTACCGGTTTCTTAAGCTAGATGCTGATGGCAATCTCCGGTTATATTCATGGATTGAAGCTTCACAATCATGGAGATCAGTCTGGCAAGCTGTCGAGAACCAGTGCAAGGTCTTTGCAACTTGTGGTGAACGTGGTATCTGTGTTTTCACGGCTTCAGGTTCTGCTGATTGCCGGTGCCCGTTTGAGAAAACTGAGAATGACAAATGTTTGGTTCCATATGAACAAGATTGTAAATCTGGCTCTACTATGCAAGCGTATAAGAACATGTATCTTTATGGAATTTATCCCCCTGATGATTCAGTTGTCATAAGCAGTTTACAGCATTGCCAACAGTTGTGCTTGAATGACCTACACTGTACAGTTGCAACCTTTTCCAACGATGGTATTCCACAATGCTCGATAAAGAAAACCGAGTATTTAACCGGCTATGCAGATCCATCTGTAAGCTCAGTGTCATTTGTTAAGAAATGCTTGGGTCCGTTTGCTGTAAACCCTGATCTCATGAAATCACCTCCGCCAAAGCTGCCTCCTAGCCTTTGTGTTCGTTGTCTAATAGGAGCATCGTCGGGCACATTTTTCATCGTTGCTATCCTCCAGCTAGGAATTTTTTTCTACATCTGTAGAAGAAAAAACTCTAATAAGAAAGAAGCCAATCTTGCTTTCACATACCCAGATTCAAAGGGCTTGATTGTCTTATCCTTCTCAGAAATCAAGAGCCTCACCGAGGATTTCAAGAATCAAATCAGATCAGATATGTTCGAAGGTGTGCTACCGAACAATTGCTTGATTACAGTTAAAGACCTCAATGCATCCATAGAAGAAAGGAAGTTCCGGTGCGCTGTTGTGAAGATGGGGAACATCCATCACAAGAACCTTGTGAAGCTGGAGGGTTATTGTTGCGAGCTTAATCATAGATTTTTGGTGTATGAATATGCCAAAAATGGTTCACTGGATAAATACATAGAAGATTCTACTCTTTGCAAGAAGCTAATTTGGAGTAAGAGGATCGAGATATGCTCGAGTGTGGCGAAGGCCATAAGTTATTTGCACTCTGGTTGTAGGGAGTTTGTAAGCCATGGAAACTTGAAGTGTGAGAATGTGATATTGGATGAAAACTTCGAGGCCAAGGTAACTGATTTCGGGTTTGCAATAATAAATGGTGAAGCCTCATATTGCAGTGCTTCAGCTGAGAAAGATGTAGCAGATTTTGGCAATTTAGTGTTAACATTGTTGACCGGATGTAGAGATCACGAAGAACTTTGGGAATGGACGTATAAAGAATGGATCGAAGGAAGGGCAAGCAACGTGGTTGATAAAAGAATCGATGGTGGTGCCGATTCAGAGGAACTGGAACGCACATTAAGAATTGCGTTTTGGTGCCTTCAAACGGAAGAACTCAGAAGGCCATCTATGTGTGAGGTAGTGAGAGTACTAGATGGCACTTTGAATGTTGATCCTCCACCACCTCCATTTGCCTTAGAGGAAGATGATACATAA 2217 0.4204 MLPLLLCIFIGVLIHPVVAAVIPLGSKLSVLDNDYWVSSNGDFVIGFFNTSDEPNQYSVGIRFNPKSIPHSQQKVVWVAGAHVTVSNMSYFQLTLDGELVLFDSLQRVTTWTSGTGNRSAVSAALHDNGNFVLIDTEQNIIWQSFDTLSDTLLPGQTFSAYQLLRPASKNPISSYYSLYMNASGYLQLRWKSNITYWVSKSPPASNLTAVLTTSGALQLVDQSFKPVWSVFGEDHNDSVNYRFLKLDADGNLRLYSWIEASQSWRSVWQAVENQCKVFATCGERGICVFTASGSADCRCPFEKTENDKCLVPYEQDCKSGSTMQAYKNMYLYGIYPPDDSVVISSLQHCQQLCLNDLHCTVATFSNDGIPQCSIKKTEYLTGYADPSVSSVSFVKKCLGPFAVNPDLMKSPPPKLPPSLCVRCLIGASSGTFFIVAILQLGIFFYICRRKNSNKKEANLAFTYPDSKGLIVLSFSEIKSLTEDFKNQIRSDMFEGVLPNNCLITVKDLNASIEERKFRCAVVKMGNIHHKNLVKLEGYCCELNHRFLVYEYAKNGSLDKYIEDSTLCKKLIWSKRIEICSSVAKAISYLHSGCREFVSHGNLKCENVILDENFEAKVTDFGFAIINGEASYCSASAEKDVADFGNLVLTLLTGCRDHEELWEWTYKEWIEGRASNVVDKRIDGGADSEELERTLRIAFWCLQTEELRRPSMCEVVRVLDGTLNVDPPPPPFALEEDDT 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0251 738 ProSiteProfiles Protein kinase domain profile. 432 738 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal20g0251 738 Pfam S-locus glycoprotein domain 236 299 IPR000858 GO:0048544
Lal20g0251 738 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD3-1 4 735 - -
Lal20g0251 738 ProSiteProfiles Bulb-type lectin domain profile. 149 267 IPR001480 -
Lal20g0251 738 Gene3D - 20 147 IPR036426 -
Lal20g0251 738 Pfam Protein tyrosine and serine/threonine kinase 502 634 IPR001245 GO:0004672|GO:0006468
Lal20g0251 738 Pfam D-mannose binding lectin 75 159 IPR001480 -
Lal20g0251 738 CDD B_lectin 37 146 IPR001480 -
Lal20g0251 738 SUPERFAMILY Protein kinase-like (PK-like) 493 718 IPR011009 -
Lal20g0251 738 PANTHER OS07G0415500 PROTEIN 4 735 - -
Lal20g0251 738 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 199 IPR036426 -
Lal20g0251 738 ProSiteProfiles Bulb-type lectin domain profile. 21 146 IPR001480 -
Lal20g0251 738 SUPERFAMILY alpha-D-mannose-specific plant lectins 168 266 IPR036426 -
Lal20g0251 738 ProSiteProfiles PAN/Apple domain profile. 317 397 IPR003609 -
Lal20g0251 738 Gene3D - 149 267 IPR036426 -
Lal20g0251 738 SMART blect_4 27 148 IPR001480 -
Lal20g0251 738 PIRSF SRK 1 737 IPR024171 GO:0004674
Lal20g0251 738 Gene3D Transferase(Phosphotransferase) domain 1 552 725 - -
Lal20g0251 738 Gene3D Phosphorylase Kinase; domain 1 445 551 - -
Lal20g0251 738 SMART ntp_6 318 396 IPR003609 -
Lal20g0251 738 Pfam PAN domain 323 393 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0251 Lal-Chr20 1790728 1792944 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0251 465 718 Receptor kinase-like Gene Family AT3G19300 33.449 2.75e-36 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lal20g0251 PK_Tyr_Ser-Thr 2.9e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0251 - - gmx:100809478 1135.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0251 20 1790728 1792944 Lal20g0251 20 1790728 1792944 ECH