Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0184 ATGTCTATCTCTAGAAAGAAGCTTCTCTTAAACACAGTGTCTGTGAAACTAGGTTGTGGAAGCTGCAGAAGACCAAAGTTGAGTAACATTTTCCACCCTAAGCCAAAACCAAAGAACCCCACTTACACAAAAAACAAACTTTACAACCATTCCTCTTCTTCAGACAGCACTATCCCAACCAAAACTACCACCACATTCTCACCTTGCTACATTGATTCCTCAAACTTTTCCGAGTCAGATACTTATGTTATGGCACAGAAGATAGTAGGGAGATTTGGCAGAAGTGGAAGAGAAGGTGTGGCTGTGGAGAAAGATTCTGATGACCCTTATTTGGATTTCAGGCATTCCATGCTGCAAATGATATTAGAGAATGATATACACTCCAAAGATGATCTTAGAGAGCTTCTGAACTGTTTTCTTCAGTTGAACTCACCCTATCACCATGGTGTTATAGTTAGAGCTTTCACAGAGATCTGGAATGGTGTTTTTTCTGTTAGGTCCAACTCACCCAGGTTACACTTCAACCATAAGGCACGTGAGTTCTAA 546 0.4066 MSISRKKLLLNTVSVKLGCGSCRRPKLSNIFHPKPKPKNPTYTKNKLYNHSSSSDSTIPTKTTTTFSPCYIDSSNFSESDTYVMAQKIVGRFGRSGREGVAVEKDSDDPYLDFRHSMLQMILENDIHSKDDLRELLNCFLQLNSPYHHGVIVRAFTEIWNGVFSVRSNSPRLHFNHKAREF 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0184 181 ProSiteProfiles OVATE domain profile. 102 161 IPR006458 -
Lal20g0184 181 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 1 167 IPR038933 GO:0045892
Lal20g0184 181 MobiDBLite consensus disorder prediction 29 59 - -
Lal20g0184 181 Pfam Transcriptional repressor, ovate 106 162 IPR006458 -
Lal20g0184 181 MobiDBLite consensus disorder prediction 42 59 - -
Lal20g0184 181 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 100 160 IPR006458 -
Lal20g0184 181 PANTHER TRANSCRIPTION REPRESSOR OFP6-LIKE 1 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0184 Lal-Chr20 1286627 1287172 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lal20g0184 Ovate 1e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0184 - - mtr:MTR_7g105790 240.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0184 20 1286627 1287172 Lal20g0184 20 1286627 1287172 ECH