Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0169 ATGGTGATTGGGGATTGTGAGATGAACTCCCAAGGAGATCAAGGAGAAGTTGAATCAGCACTACAAATGGAACACAACCAAAGTGGAATGAAGTCATTTTCATCACTCGGAAGACAATCATCAATTTACTCACTCACCTTGGACGAGTTTCAACACACACTTGTGTCTGAGAATGGAAAGAATTTTGGTTCCATGAATATGGATGAGTTTCTCACCAGCATTTGGAATGCTGAAGACAACATTAACCAACCCATCAACAACCACAACCACAATAACAACATGTCCCTAACCGAAACAACTTCGGCCGAGAAAGACATCACAACAATAAGGAAGCAGCCAAGTCTGCCAAGACAAGGGTCACTAACCCTTCCTGCACCACTTTCTAGGAAAACTGTGGAACAAGTTTGGTCTGAGATACACCAACACCAACAATATAGCAATAACAACAACAATGGGAATGTTCAGAATACCGAGTCTGCCCCTCGCCAACCAACTTTCGGAGAGATGACTTTGGAAGATTTCTTGGTTAAGGCAGGGGTAGTTAGAGAAACATGTGCAATGAATCCTGCACCAGTGTCTCACCAACAACAACAATATGGGGTGTTCACGAATAACAACACTACTATGCCACCTTTTGTTATTGGTGGTGGAGTTGGGAATGTGGTTGCGCCACCTTATACCACGTGGGTATCATCCTCCACCACCACCCCACCACCAGGGATTTGTTTCCCTGGAGGTGGAGGTGGATATGGGGTGGCAATGGCACCCCCACATAATATAGGAATTGGCGGGCCCGTGAGCCCGGCGTCGTCGAATGAAAACTCTGCTGGTCAATTTGGTATTGAGATGAGAGGAAGGAAGAGAATGGTAGATGGTCCGGTGGAAAAGGTGGTTGAAAGAAGGCAGAGAAGGATGATCAAGAATAGAGAATCAGCTGCCAGATCTCGAGCCAGAAAACAGGCATACACAGTTGAATTAGAAGCAGAATTGAATATATTAAGAGAAGAGAACAACCAACTAAAGCAGGCGCTGGCCGAGCTTGAGAGAAGAAGAAAGCAACAGTGTTTTGAGGAAGTGAATCTGGGGATTCAAACCAGAGCTCAGAAGGCAAAAGAGAAACTTAGAGCTATGAGAAGGAACCTAAGTTGTCCTTTGAAGTGTGGAAACACTAGATTGAAGTCAAAGAGAGAAAGAAACAAGATGAAAGAGATGGAATTTAATCTGAGAACCTTGAAGTTTGGATCATCCAATTTGGATGACTAG 1263 0.4426 MVIGDCEMNSQGDQGEVESALQMEHNQSGMKSFSSLGRQSSIYSLTLDEFQHTLVSENGKNFGSMNMDEFLTSIWNAEDNINQPINNHNHNNNMSLTETTSAEKDITTIRKQPSLPRQGSLTLPAPLSRKTVEQVWSEIHQHQQYSNNNNNGNVQNTESAPRQPTFGEMTLEDFLVKAGVVRETCAMNPAPVSHQQQQYGVFTNNNTTMPPFVIGGGVGNVVAPPYTTWVSSSTTTPPPGICFPGGGGGYGVAMAPPHNIGIGGPVSPASSNENSAGQFGIEMRGRKRMVDGPVEKVVERRQRRMIKNRESAARSRARKQAYTVELEAELNILREENNQLKQALAELERRRKQQCFEEVNLGIQTRAQKAKEKLRAMRRNLSCPLKCGNTRLKSKRERNKMKEMEFNLRTLKFGSSNLDD 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0169 420 Coils Coil 323 357 - -
Lal20g0169 420 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 298 350 IPR004827 GO:0003700|GO:0006355
Lal20g0169 420 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 303 318 IPR004827 GO:0003700|GO:0006355
Lal20g0169 420 Gene3D - 298 354 - -
Lal20g0169 420 SMART brlzneu 296 360 IPR004827 GO:0003700|GO:0006355
Lal20g0169 420 Pfam bZIP transcription factor 300 352 IPR004827 GO:0003700|GO:0006355
Lal20g0169 420 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 12 384 IPR043452 GO:0003700|GO:0045893
Lal20g0169 420 PANTHER ABA RESPONSE ELEMENT-BINDING FACTOR 12 384 IPR029803 GO:0003700|GO:0005634|GO:0009737|GO:0045893
Lal20g0169 420 SUPERFAMILY Leucine zipper domain 300 349 IPR046347 GO:0003700|GO:0006355
Lal20g0169 420 CDD bZIP_plant_BZIP46 300 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0169 Lal-Chr20 1169826 1171833 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0169 16 355 bZIP Transcription Factor Family AT2G36270 48.000 3.97e-96 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal20g0169 bZIP_1 1.5e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0169 K14432 - gmx:100818567 419.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0169 20 1169826 1171833 Lal20g0169 20 1169826 1171833 ECH
Lal1g1762 1 19958541 19960829 Lal20g0169 20 1169826 1171833 LSH