Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0142 ATGGACTTTGATATGAAGCAATGGAGAAACCAGGTGCATGAGTCAGAGGAACAACAACAACATTGTACAAAGATGCCAAAACTTCACCCTGGAACCCATCAAGTTTCTGCATCTTCTGCTCTTCCTTTGTTTTTACCTGAACCCAACACCAAAGTCAGTACCTTGTCAGATTCAACATTAGCTACCACTAACAGATTTCCCAAGATGGGGAGTTATTTCAGTTTGGGACAGTGGCAGGAGCTGGAGTTGCAGGCATTGATATTCAGGTACATGTTAGCTGGTGCTGCTGTTCCTCATGAACTTCTTCAACCAATAAAGAAAAGTCTTCTTTATTCTCCTACTACTCCTTATTTTCTTCATCACCATTCTATTCAACATTATCAACCTGCTGCTGAATTGATGCAATCAGGGTATTGGGGAAGAGGAGCAATGGATCCAGAACCTGGTCGGTGCCGGAGAACGGACGGGAAGAAGTGGCGGTGCTCGAGGGATGTGGTGGCGGGTCAGAAGTACTGTGAAAGACACATGCATCGTGGTAAAAACCGTTCAAGAAAGCCTGTGGAACTACCCACACCTATCACTATTGCTTCTTCATCATCCTCCATTTCTTCACCGTCTCTCGCTACTGCTTCTCTGAAATCACCTTTCGATCTCCTTCACCTTAATCAATGTCCCTCTGGGACCAAGAATGAAAGAAAGAGCCTGTTTGAAACCCAAGATCATGTGGGTGAGGATGGTAGATCAGGTGGCAATATGCTGAGGCATTTCTTTGATGATTGGCCAAGGTCACTGCAGCAATCTTCTGATAGTGGTGGCGGGGTGAACTCGGTAACGTGCCTCACTATTTCAATGCCTGAAAATAGTTCTTCTGATGTGTCATTGAAATTATCAAGTGGCTATGGAGAAGAACCATGCCCAAGGAATGGGAATGTGGAACCAGAGGGAGAGCAAGTGCAAGTGAATTGGGCTGGGGGATGGACTTCAACTAACCAAGTAGCTTCAATGGGAGGACCACTTGCAGAGGCACTGAGATCATCCACTTCAAGTTCATCACCCACCAGTGTTTTGCATCACCTACCTCGTGGTTCTGCCTGA 1095 0.4594 MDFDMKQWRNQVHESEEQQQHCTKMPKLHPGTHQVSASSALPLFLPEPNTKVSTLSDSTLATTNRFPKMGSYFSLGQWQELELQALIFRYMLAGAAVPHELLQPIKKSLLYSPTTPYFLHHHSIQHYQPAAELMQSGYWGRGAMDPEPGRCRRTDGKKWRCSRDVVAGQKYCERHMHRGKNRSRKPVELPTPITIASSSSSISSPSLATASLKSPFDLLHLNQCPSGTKNERKSLFETQDHVGEDGRSGGNMLRHFFDDWPRSLQQSSDSGGGVNSVTCLTISMPENSSSDVSLKLSSGYGEEPCPRNGNVEPEGEQVQVNWAGGWTSTNQVASMGGPLAEALRSSTSSSSPTSVLHHLPRGSA 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0142 364 MobiDBLite consensus disorder prediction 321 358 - -
Lal20g0142 364 ProSiteProfiles QLQ domain profile. 72 107 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lal20g0142 364 Pfam WRC 146 188 IPR014977 -
Lal20g0142 364 SMART QLQ_2 71 107 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lal20g0142 364 PANTHER - 11 363 IPR031137 GO:0005634|GO:0006351|GO:0032502
Lal20g0142 364 PANTHER GROWTH-REGULATING FACTOR 3 11 363 - -
Lal20g0142 364 MobiDBLite consensus disorder prediction 1 23 - -
Lal20g0142 364 ProSiteProfiles WRC domain profile. 145 189 IPR014977 -
Lal20g0142 364 MobiDBLite consensus disorder prediction 287 364 - -
Lal20g0142 364 MobiDBLite consensus disorder prediction 1 34 - -
Lal20g0142 364 Pfam QLQ 73 105 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0142 Lal-Chr20 945845 949142 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0142 1 359 GRF Transcription Factor Family AT3G52910 48.469 3.40e-89 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Lal20g0142 WRC 8.4e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0142 - - aip:107648821 501.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0142 20 945845 949142 Lal20g0142 20 945845 949142 ECH
Lal11g1207 11 15837423 15838777 Lal20g0142 20 945845 949142 LSH