Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0132 ATGGAAATGCCTGGTAGAAGATCCAACTACTCGCTTCTAAGTCAACTTCCCGACGATCAGTTCTCCGGAACAACCACAACGCCGCCGTTCGATTCATCCTCCGGCGACGGCAATAATTACAATAACAGGCATGGGAATCGGATCGGGAATTTGTATCCACCGTCGATCGGGTTGCAGAGGCAGTCCAGTGGGAGCAGCTTCGGCGAGAGCTCGCTTTCCGGCGAGTGTTACGCGCCTACGATTTCGAACGCGGCTGCGAACGATATGGATGGATATGGATACGGAGACGTGAGAGTTAAACTGGAGGAGGATGCGGTGGTGAGAATCGGAGGAACGTTGGGGAAGAGCTGGGCGCAGCAGACGGAGGAGAACTATCAGTTACAGATGGCTTTGGCTCTTCGGCTTTCGTCTGATGCCGCATGCGCTGATGATCCTAATTTTCTGGATCCAGGGCCAGATGATTCTGCTTTGAGTTCATTGTCGTCGAATTCGGAAGAGACACTGTCGCATAGGTTCTGGGTAAATGGCTCTCTATCATACTTCGACAAAATTCCTGATGGGTTTTACTTAATTCACGGGATGGATCCCTTTGTCTGGACTATATGCATTGATCTTCTGGAAAATGGCCGAATTCCAACAGTTGATACACTAAAGTCAATAGAATCCTCCGCCGACTCTTCACTTGAAGTAGTTTTGGTGGATCGGCGAAGTGATGCAAGCTTAAGGGAACTGCAAAATCGAGCACATAACATTTCTTCTAGCTGCATAACGACAACAGAGGTTGTAGACCAGCTTGCCAAACTGGTTTGCAATTGCATGGGGGGTTCAGCTTCTGTTTGGGAAGATGATTTTTTCCCCATCTGGAGGAACTGCATCAATTATCTGAAAGATTGCTTAAGATCCGTTGTTGTTCCAATTGGCAATTTATCTATTGGACTCTGCAGGCATCGTGCTATATTATTCAAAGTACTAGCCGACACCATTGATTTACCATGTCGAATTGCAAAGGGCTGTAAATATTGCTCCAAAGATGATGCCTCGTCGTGTCTTGTCCGATTTGGGCTTGAAAGGGAGTATCTGATTGATCTAATTGGGAATCCGGGTTGTTTATGCGAACCTAATTCCATGGTCAATGGTCCATCTTCCATCTCATTTTCTTCGCCCTTGCGTTTTTCAAGACTTAAGCCAGCTGAACCTACCATTGATTTCAGGTCATTGGCCAAACAGTATTTCTCGGATTGTCTGTCTCTTGAGCTTGTCTTTGATAATGGTTCTGCAGGTGATATCTTATTTCCTATGATCTGTACTGATTGGGATTCTGGATTCTCCATTCCAGAACAGTTGGATGGGAAGCACAAGGATAGGAATAACCCTAGACCAAATCCAAAAGACAGCAACAGAAGTTCTATTGTTCCTCCTCAAGCTTATCATCCAAGCCCACATGATCAAGGCTCTGAAACATTTAAGTCATGTAACATTGTAGAATCAACAGGCAAGGATCCACTGCCTTTAAAGCATAACCATCCTGGTCATAGAGGTATACAAACCCCATTAGCAGTAACAAATTCCAATGTAGATGTTATTGACAGTAGGAGGTTTGTTGAAGGAAGTCAACTGATTCCAAGCAAACCTACTAGAGATCTTGCCCTTGATATGGAGGATTTGGACATACCATGGGGTGATCTTGTTTTAAAAGAGAAAATAGGATCAGGATCTTTTGGAACTGTACATCGTGCTGAGTGGAATGGCTCGGAGGTTGCTGTAAAAATTCTAATGGAACAAGATTTTTATGCTGAACGCTCCAGGGAATTCCTGAGGGAGGTTGCAATAATGAAACTCTTGCGGCATCCAAACATCGTTTTATTTATGGGTGCAGTCACTCAACCTCCTAACTTATCAATTGTCACAGAATATTTATCAAGGGGTAGCTTATATAGGCTGCTACATAAACCTGGTGCCAAAGAGATGTTGGATGAGAGGCGTAGGCTTAGTATGGCTTATGATGTGGCTAAGGGGATGAATTATCTTCATAAACGTAATCCTCCTATTGTTCATAGAGATCTGAAATCTCCAAACCTTCTCGTTGACAAGAAATATACAGTTAAGGTTTGTGATTTTGGGCTTTCCCGACTAAAGGCAAATACATTTCTCTCATCCAAGTCTGCGGCTGGGACTCCTGAGTGGATGGCTCCAGAAGTTCTCCGTGATGAGCCATCAAATGAGAAGTCAGATGTTTACAGCTTTGGTATAATTTTGTGGGAGCTTGCGACATTGCAACAGCCATGGAGTAATTTGAATCCAGCACAGGTTGTAGCGGCTGTTGGGTTCAAGGGAAAAAGACTGGAGATACCACATGACTTGAATCCTCAATTAGCTTCAATAATTGAGGCTTGCTGGGCCAATGAACCTTGGAAACGCCCTTCTTTTTCAAGTATTATGGACTCCTTGAGAGTATTGCTCAAACCCCCTGCACCTAAATCCAGTCGTCCAAACATGCCATTACTTGCCTGA 2511 0.4436 MEMPGRRSNYSLLSQLPDDQFSGTTTTPPFDSSSGDGNNYNNRHGNRIGNLYPPSIGLQRQSSGSSFGESSLSGECYAPTISNAAANDMDGYGYGDVRVKLEEDAVVRIGGTLGKSWAQQTEENYQLQMALALRLSSDAACADDPNFLDPGPDDSALSSLSSNSEETLSHRFWVNGSLSYFDKIPDGFYLIHGMDPFVWTICIDLLENGRIPTVDTLKSIESSADSSLEVVLVDRRSDASLRELQNRAHNISSSCITTTEVVDQLAKLVCNCMGGSASVWEDDFFPIWRNCINYLKDCLRSVVVPIGNLSIGLCRHRAILFKVLADTIDLPCRIAKGCKYCSKDDASSCLVRFGLEREYLIDLIGNPGCLCEPNSMVNGPSSISFSSPLRFSRLKPAEPTIDFRSLAKQYFSDCLSLELVFDNGSAGDILFPMICTDWDSGFSIPEQLDGKHKDRNNPRPNPKDSNRSSIVPPQAYHPSPHDQGSETFKSCNIVESTGKDPLPLKHNHPGHRGIQTPLAVTNSNVDVIDSRRFVEGSQLIPSKPTRDLALDMEDLDIPWGDLVLKEKIGSGSFGTVHRAEWNGSEVAVKILMEQDFYAERSREFLREVAIMKLLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKPGAKEMLDERRRLSMAYDVAKGMNYLHKRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKANTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGIILWELATLQQPWSNLNPAQVVAAVGFKGKRLEIPHDLNPQLASIIEACWANEPWKRPSFSSIMDSLRVLLKPPAPKSSRPNMPLLA 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0132 836 PRINTS Tyrosine kinase catalytic domain signature 636 649 IPR001245 GO:0004672|GO:0006468
Lal20g0132 836 PRINTS Tyrosine kinase catalytic domain signature 677 695 IPR001245 GO:0004672|GO:0006468
Lal20g0132 836 PRINTS Tyrosine kinase catalytic domain signature 724 734 IPR001245 GO:0004672|GO:0006468
Lal20g0132 836 PRINTS Tyrosine kinase catalytic domain signature 743 765 IPR001245 GO:0004672|GO:0006468
Lal20g0132 836 PRINTS Tyrosine kinase catalytic domain signature 787 809 IPR001245 GO:0004672|GO:0006468
Lal20g0132 836 MobiDBLite consensus disorder prediction 446 487 - -
Lal20g0132 836 MobiDBLite consensus disorder prediction 55 69 - -
Lal20g0132 836 CDD STKc_MAP3K-like 568 816 - -
Lal20g0132 836 Gene3D Phosphorylase Kinase; domain 1 555 640 - -
Lal20g0132 836 Pfam Protein tyrosine and serine/threonine kinase 563 816 IPR001245 GO:0004672|GO:0006468
Lal20g0132 836 Gene3D Transferase(Phosphotransferase) domain 1 641 827 - -
Lal20g0132 836 SMART serkin_6 562 819 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal20g0132 836 ProSitePatterns Serine/Threonine protein kinases active-site signature. 683 695 IPR008271 GO:0004672|GO:0006468
Lal20g0132 836 PANTHER SERINE/THREONINE-PROTEIN KINASE CTR1 98 820 - -
Lal20g0132 836 ProSitePatterns Protein kinases ATP-binding region signature. 568 589 IPR017441 GO:0005524
Lal20g0132 836 Pfam Ethylene-responsive protein kinase Le-CTR1 165 371 - -
Lal20g0132 836 MobiDBLite consensus disorder prediction 1 69 - -
Lal20g0132 836 SUPERFAMILY Protein kinase-like (PK-like) 542 816 IPR011009 -
Lal20g0132 836 MobiDBLite consensus disorder prediction 446 461 - -
Lal20g0132 836 MobiDBLite consensus disorder prediction 8 48 - -
Lal20g0132 836 ProSiteProfiles Protein kinase domain profile. 562 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal20g0132 836 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 98 820 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0132 Lal-Chr20 872408 880072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0132 1 832 MAP Kinase Kinase Kinase AT5G03730 61.547 0.0 963
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Lal20g0132 PK_Tyr_Ser-Thr 2.1e-71 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0132 20 872408 880072 Lal20g0132 20 872408 880072 ECH
Lal20g0132 20 872408 880072 Lal13g1407 13 13425042 13436724 PCT
Lal13g1407 13 13425042 13436724 Lal20g0132 20 872408 880072 PCT