Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0106 ATGGAGGTTCAAAGGAAGAAGATGTTCAAGTCTTTGATTACAAAGATACTAAAGGCACTTCAATTTTTATCACACAATGAAGCTTACCCAAGAAGAGTTTATACAATAAGTGACATTATTGATGATGAAAGTGAAGCTACAACATGGGTGCCAAAAGATGTTAAAGAAGGACATTTTGCTGTTATAGCAATCAAGGGTGAAGAAGCAAAAAGGTTCATAGTTGAGTTAGATTACTTAACTGATCCTCATTTCTTGAAACTTTTGGAGAAAGCTAAGGAAGAGTTTGGATTTGAACAAAAGGGTGCTCTTATTATTCCTTGTAGGCCTCAAGAACTTGAGAAGATTATAGAGAATCGACAAGTGGATAATGCTACTATGTAA 381 0.3465 MEVQRKKMFKSLITKILKALQFLSHNEAYPRRVYTISDIIDDESEATTWVPKDVKEGHFAVIAIKGEEAKRFIVELDYLTDPHFLKLLEKAKEEFGFEQKGALIIPCRPQELEKIIENRQVDNATM 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0106 126 Pfam Auxin responsive protein 48 117 IPR003676 GO:0009733
Lal20g0106 126 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 8 121 IPR003676 GO:0009733
Lal20g0106 126 PANTHER F8A24.8 PROTEIN 8 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0106 Lal-Chr20 690063 690443 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0106 41 107 Calmodulin-binding Proteins AT5G20810 49.254 2.41e-14 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0106 K14488 - gmx:100794597 156.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0106 20 690063 690443 Lal20g0106 20 690063 690443 ECH
Lal1g1806 1 20415584 20415973 Lal20g0106 20 690063 690443 LSH