Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0103 ATGTTCAATCCAAGTAGAGAAAAGGAGACCAAAGTGGATGATATGATATTGCTATATTGGCTGATAGAACAGAACAATGCAAGAGGTTGGAAAGTGGAATATTGTTCTGCTAAGGGGTGCTTGGAGATGGTTATATATGATCATTCAGATGTTCTTCAGTGGGGTCTTAATATTCTTAATGGTGATCCTGGTTATAATACTGGATACTACAGCGACGTAATTCAAGATGATACTAGTGACATCTATAATGGACACTATTTCCAAAACAATTATGAAAATGATTGTAACCATGTAGAGAATGATGAGATTATTGCTCGTACTCTTCAAGAAGAGTTTTCACAGCTAGAGATTGATGAGTGTTCAAGGTATGTACAAGAAGGTGAAGGACAATCACAAGCTCCTGAGACTGAAACTGAGCCTGCATATGATTGGCATAACTCTGCAATGGTGAACTATTGTCCAGGAGGTCACGATTATGAACAAGAAGGAATTGATGATGTAGAACCTTCTAGTTCATGTTCTAGTCCCTGTGAAACAGGGGAATCTTCATTGGAGCTAACTGACAATTATCCACTTGATGAAGTAGGGAGCAGATTGAGTGAGATGATACTAATCCCTCATGTTCCAAAAATCAATGGAGAAATTCCTTCAATTGATGAAGCAACATCAGATCATCAAAGACTTCTGGACAGATTGCTGGTATACGACTTTGTGGAGCACAGGGTACAAGGTGATGGTAATTGTCAGTTCCGTGCACTATCTGATCAATTGTATAATGCACCTGATCACCACAAATTTGTGAGACGACAAGTGGTGAATCAGCTCAAATCTAATCCTGAAATTTATGGTGGATATGTTCCTATGGAATATGGTGATTACTTGGGGAATATGTCTAAGAGTGGAGAATGGGGTGATCATGTCACTCTACAAGCAGCTGCTGATAAGTATGGCGTGAGAATATTCGTGATGACTTCTTTCAAGGACACCTGTTGCATAGAGATTCTTCCAAATTTTGAGAAGCCAAAAGGAGATGTAGCTTCAAGTGACTCAAGAAAGAAAAAAAGGTGGTGGAGAAGGAACTCTGGAAGTAAGAAGAATTAG 1101 0.3906 MFNPSREKETKVDDMILLYWLIEQNNARGWKVEYCSAKGCLEMVIYDHSDVLQWGLNILNGDPGYNTGYYSDVIQDDTSDIYNGHYFQNNYENDCNHVENDEIIARTLQEEFSQLEIDECSRYVQEGEGQSQAPETETEPAYDWHNSAMVNYCPGGHDYEQEGIDDVEPSSSCSSPCETGESSLELTDNYPLDEVGSRLSEMILIPHVPKINGEIPSIDEATSDHQRLLDRLLVYDFVEHRVQGDGNCQFRALSDQLYNAPDHHKFVRRQVVNQLKSNPEIYGGYVPMEYGDYLGNMSKSGEWGDHVTLQAAADKYGVRIFVMTSFKDTCCIEILPNFEKPKGDVASSDSRKKKRWWRRNSGSKKN 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0103 366 MobiDBLite consensus disorder prediction 352 366 - -
Lal20g0103 366 MobiDBLite consensus disorder prediction 165 184 - -
Lal20g0103 366 Pfam OTU-like cysteine protease 243 329 IPR003323 -
Lal20g0103 366 MobiDBLite consensus disorder prediction 342 366 - -
Lal20g0103 366 PANTHER OTU DOMAIN CONTAINING PROTEIN 67 342 - -
Lal20g0103 366 ProSiteProfiles OTU domain profile. 237 340 IPR003323 -
Lal20g0103 366 PANTHER OTU DOMAIN-CONTAINING PROTEIN DDB_G0284757-LIKE ISOFORM X1 67 342 - -
Lal20g0103 366 MobiDBLite consensus disorder prediction 167 184 - -
Lal20g0103 366 Gene3D - 219 355 - -
Lal20g0103 366 SUPERFAMILY Cysteine proteinases 223 333 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0103 Lal-Chr20 661122 667641 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0103 - - aip:107648617 487.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0103 20 661122 667641 Lal13g1485 13 14352356 14357508 PCT
Lal20g0103 20 661122 667641 Lal24g0773 24 6002288 6007244 PCT