Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0092 ATGATGGGTGAGTCAAAGTGTGGAAGGCTGAAGAAGGTGCGTGGCTTGTGTATTCTTCTTCATTGTGTTCCTGCTTCTTCACTCTCCAAAATCTTCATATTTATGCTTCTCTATCACATGAACATTCCTTGTTCTTTTTGTTTCATAACATCGCTCAAAAAACCAACCAACCAAGAAGAATCAGATGGAGATAAAGATGGAACCTTTCGTGTTTTCACTCAGACAGAATTAAAATCTGCCACTCGTGGCTTTCATCCCTCAGAAAAGGATGGAGAAGGAGGATTTGGTTCTGTCTACAAGACTGATATATTAAGGGTTGTGAAGGGGAAGCTAAGGGATGGTACTTTGGTGGCAGTGAAAGTGCTTTCAATTGAGGTTGAATCCATGAGAGCAGAGAGGGAGTTTATAGCAGAATTGGCTACACTAGCAAATATCAAGCACCAAAATCTAGTTATTCTTAGAGGGTGTTGTGTGGAAGGAGCTCAAAGATATTTAATATATGATTACATGGAGAACAATCATACTTTCCTAGGTTCAGAGCTTAAGAGGATGAGATTTAGGTGGGAAACAAGGAGGAACATATCCATAGGTGTGGCTCATGTGCTTGCTTTTCTCCACGAGGAACTGAAGCCTCATATTGTGCATAGAGATATCAATAGGGGAATGTAG 669 0.4051 MMGESKCGRLKKVRGLCILLHCVPASSLSKIFIFMLLYHMNIPCSFCFITSLKKPTNQEESDGDKDGTFRVFTQTELKSATRGFHPSEKDGEGGFGSVYKTDILRVVKGKLRDGTLVAVKVLSIEVESMRAEREFIAELATLANIKHQNLVILRGCCVEGAQRYLIYDYMENNHTFLGSELKRMRFRWETRRNISIGVAHVLAFLHEELKPHIVHRDINRGM 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0092 222 SUPERFAMILY Protein kinase-like (PK-like) 71 219 IPR011009 -
Lal20g0092 222 ProSiteProfiles Protein kinase domain profile. 84 222 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal20g0092 222 Gene3D Transferase(Phosphotransferase) domain 1 169 221 - -
Lal20g0092 222 Pfam Protein tyrosine and serine/threonine kinase 90 218 IPR001245 GO:0004672|GO:0006468
Lal20g0092 222 Gene3D Phosphorylase Kinase; domain 1 54 168 - -
Lal20g0092 222 PANTHER RECEPTOR-LIKE KINASE 47 219 - -
Lal20g0092 222 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 47 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0092 Lal-Chr20 578519 579923 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0092 72 218 Receptor kinase-like Gene Family AT1G53430 46.000 2.91e-36 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lal20g0092 PK_Tyr_Ser-Thr 3.7e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0092 - - gmx:100785251 236.113