Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0084 ATGAAACATAAAATGAGGAAATATGTAATAAATTGTTTCTTCATTTATCTCCCGGATTCCAGAGGTTTCAACCCAGCCTTGATAGTTCTCCTTGTTGTTGTTGGGTTACTATTGACATTCCTAATTGGAAATTATGTGCTCTACATATATGCACAGAAGACCATACCTCCTAGAAAGAAGAAACCAGTGTCAAAGAAGAAGCTGAAAAGAGAGAGACTGAAGCAAGGTGTTTCTGCACCTGGAGAGTAG 249 0.3815 MKHKMRKYVINCFFIYLPDSRGFNPALIVLLVVVGLLLTFLIGNYVLYIYAQKTIPPRKKKPVSKKKLKRERLKQGVSAPGE 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0084 82 PANTHER DNA-BINDING PROTEIN S1FA1-RELATED 18 82 - -
Lal20g0084 82 MobiDBLite consensus disorder prediction 57 82 - -
Lal20g0084 82 Pfam DNA binding protein S1FA 19 82 IPR006779 GO:0003677|GO:0005634|GO:0006355
Lal20g0084 82 PANTHER DNA-BINDING PROTEIN S1FA2 18 82 IPR006779 GO:0003677|GO:0005634|GO:0006355
Lal20g0084 82 MobiDBLite consensus disorder prediction 58 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0084 Lal-Chr20 545130 551036 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF S1Fa-like Lal20g0084 S1FA 6.2e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0084 - - ming:122080659 99.3673