Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0076 ATGGAGACTAAAGAAGGAGAAAGGGTAGTTGTTGCTAAACCAGTTGCTTCAAGGCCTACTTGTTCTGCTTACAAATCTTTCTCAGAGCTACTTTCTGGTGCAATCAATGCCTCATCCCACATTGAATCTTCTCACACTACAGTTTCTGTTATTAGACCAAAGACAGTGAGGCTAAAACCTGCACTGAATCACCCTCCTGCTGGTTTTCTTTCTTCTCAGGGTGACATTTTTGGAGCTGCACTTAGTGATTCTTCTGATAAGAGTCCTAAACCTGATACAAAACAATCCCTGATATATAAGCCAATAGCAAAACTTGTTTCAAAGACTACTGTTTCTCTTTTGGCAAATATAGGAAATTACAGTACGAGTCAGCAACAACCACGACAACTAATGGAGTCCAATCTTCAAAATCCCAACATTGAAAAAGTTAGGACCAAAACGAGCCCAAATGTTCATCAGAGCATTGCACCACATGGTGAAACAAATCAGACTAGCGAACCTTGTAGGATTGTACAACAGAATTCGGAGGAGGACTTAAACTCTTTAGCATCTGCAACTAATGGCGATCGATCTTCTTATGATGGATATAATTGGAGGAAATATGGGCAGAAGAAAGTAAAAGGAAGTGAATATCCAAGGAGTTATTATAAGTGCACATATCCTAATTGTCCAGTGAAAAAGAAGGTTGAAAGATCATTTGATGGACAGATTGCAGAAATTGTGTATAAAGGTGAACACAACCACTCAAAGACACAGCCTCCTAAGCACAACTCGGAAGGGACACAAGGATCAGGACTGGTTCACGATACATGGAGTAATAATCACAATGAGAGGAATGAAGGTCAGAATGACACACTATTTGTACATTCAGCTTTTCATGTCAAAGCTCCACAGCCTAATGTTTCTGCTATATTTGGTGCAGCTAATGCTGGTGGAGGAAGCAAAGAAAATTCTTGTGGTCTAAGTATGGAATGTGAGGAAGGAAGGAAAGGTTTTGAGGCACAAGAAGATGAATCAAGAAGCAAAAGAAGGAAAAATGAGAATCAGTCCAATGAAGCATCAATATCAGAGGAAGGTTTAGTAGAGCCGCGGATTATGGTGCAAAGTTCTACCGATTCTGTAGTAGTTGGCGATGGCTTTCGCTGGAGGAAATATGGACAGAAAGTGGTGAAGGGCAGTCCATATGCCAGAAGTTACTATAGATGCACTAATATAAACTGTAACGTTCGCAAGCATGTGGAGAGAGCAATAGATGATCCAAGAGCATTTGTGACTACATATGAGGGAAAGCACAATCATGAGATGCCACTCAAGAACTCAGCAAGTGTTGCCTATGATAAAGATTCTCTTAGCAAAAACAAGCCATGA 1368 0.4035 METKEGERVVVAKPVASRPTCSAYKSFSELLSGAINASSHIESSHTTVSVIRPKTVRLKPALNHPPAGFLSSQGDIFGAALSDSSDKSPKPDTKQSLIYKPIAKLVSKTTVSLLANIGNYSTSQQQPRQLMESNLQNPNIEKVRTKTSPNVHQSIAPHGETNQTSEPCRIVQQNSEEDLNSLASATNGDRSSYDGYNWRKYGQKKVKGSEYPRSYYKCTYPNCPVKKKVERSFDGQIAEIVYKGEHNHSKTQPPKHNSEGTQGSGLVHDTWSNNHNERNEGQNDTLFVHSAFHVKAPQPNVSAIFGAANAGGGSKENSCGLSMECEEGRKGFEAQEDESRSKRRKNENQSNEASISEEGLVEPRIMVQSSTDSVVVGDGFRWRKYGQKVVKGSPYARSYYRCTNINCNVRKHVERAIDDPRAFVTTYEGKHNHEMPLKNSASVAYDKDSLSKNKP 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0076 455 MobiDBLite consensus disorder prediction 434 455 - -
Lal20g0076 455 SUPERFAMILY WRKY DNA-binding domain 370 436 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal20g0076 455 SUPERFAMILY WRKY DNA-binding domain 192 250 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal20g0076 455 ProSiteProfiles WRKY domain profile. 194 251 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal20g0076 455 MobiDBLite consensus disorder prediction 330 351 - -
Lal20g0076 455 Gene3D WRKY domain 361 437 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal20g0076 455 Gene3D WRKY domain 179 251 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal20g0076 455 MobiDBLite consensus disorder prediction 330 361 - -
Lal20g0076 455 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 7 439 IPR044810 GO:0003700
Lal20g0076 455 PANTHER WRKY TRANSCRIPTION FACTOR 44 7 439 - -
Lal20g0076 455 Coils Coil 332 352 - -
Lal20g0076 455 MobiDBLite consensus disorder prediction 245 281 - -
Lal20g0076 455 ProSiteProfiles WRKY domain profile. 371 436 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal20g0076 455 Pfam WRKY DNA -binding domain 378 434 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal20g0076 455 Pfam WRKY DNA -binding domain 194 248 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal20g0076 455 SMART WRKY_cls 192 250 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal20g0076 455 SMART WRKY_cls 376 435 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal20g0076 455 MobiDBLite consensus disorder prediction 254 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0076 Lal-Chr20 505809 508058 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0076 92 452 WRKY Transcription Factor Family AT2G37260 43.077 1.97e-88 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lal20g0076 WRKY 1.2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0076 - - lang:109348399 836.639