Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0049 ATGCAGAGCCAGAGTCATCGACCTATGAGAAAACCGCCACCTCTTCCGCCGTCCAGAATCTCCGGTGATGCAATTCCAGCCGGTACATCAATTCGACCAGATGCTGTGAACTACAATAATAATAATAATCAAAATATGTTCATGCAAGAAGATGGGATCACTTCATGGCTTCACTATCCAATGGATGATCCTCCATTGGATCAAACTTTCTGCGCCGATTTACTCTACGCGCCGCCGCCAACGGTTAACAATAATAACCACAAGGATGATAACAACAACAACAACAACATTGCAATGCAAACCTTTGGTCGAAATTCTCAATTGACGGAGCTCCGGAAGTGTCAGAAGTCAGTGGCTCCTCGTCCTCCAATTCCACCGCCGAGGAGGACGGAGCAGGCAGCGCCTGCAAATACATCGGACTTCTCGTACTTCTCGAAGCACAATGCTAGAACAGAGCCAGGGCCGTCATCTAGTTCGAGGGACATTGCAAGGGAATCAACTATGGTGGATTCGTGCGATACGCCTTTTTTGGCGGCGGAAGCAGCGGTTTCGAGATACTCGGAGCAGACAGAAGGTGATGGCTGCGGTAAGAGCATGAGCGCCGCCACGACATCCGACGGAGAAGGAAGGGGGACAACGACGTTTGGGATGACATCATCGGCAGGAGGTTCGAGTAGCAGCGATGAAATAGATCGGAAATTGACGGCCGAAGATCGGAAGGGGAAGGTGCGAGTGGAAACGGTAGAATGGGAGAGTCAGAGCGAGTGCGTTGTGGGCTGTGACACTGCCGCCACTTTCTCTGACACCACCAGCGCATGCCTGCTGTGCCACCTGTGTGCTCATACATTTCAGATTTTCTTTATTTAG 867 0.5075 MQSQSHRPMRKPPPLPPSRISGDAIPAGTSIRPDAVNYNNNNNQNMFMQEDGITSWLHYPMDDPPLDQTFCADLLYAPPPTVNNNNHKDDNNNNNNIAMQTFGRNSQLTELRKCQKSVAPRPPIPPPRRTEQAAPANTSDFSYFSKHNARTEPGPSSSSRDIARESTMVDSCDTPFLAAEAAVSRYSEQTEGDGCGKSMSAATTSDGEGRGTTTFGMTSSAGGSSSSDEIDRKLTAEDRKGKVRVETVEWESQSECVVGCDTAATFSDTTSACLLCHLCAHTFQIFFI 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0049 288 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 1 258 IPR031066 -
Lal20g0049 288 MobiDBLite consensus disorder prediction 183 231 - -
Lal20g0049 288 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 1 258 - -
Lal20g0049 288 MobiDBLite consensus disorder prediction 191 229 - -
Lal20g0049 288 MobiDBLite consensus disorder prediction 132 162 - -
Lal20g0049 288 MobiDBLite consensus disorder prediction 112 162 - -
Lal20g0049 288 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0049 Lal-Chr20 358513 359568 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0049 43 279 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G20180 28.514 4.54e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0049 - - gmx:100797225 161.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1859 1 20854616 20862725 Lal20g0049 20 358513 359568 LSH
Lal20g0049 20 358513 359568 Lal24g0809 24 6418444 6429853 PCT
Lal24g0809 24 6418444 6429853 Lal20g0049 20 358513 359568 PCT