Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0044 ATGATGTCATGTGGAATGTTCTGTTTTTTTTATAAAAAAAATATGTTCTTGTGGACTCTGCAGATTGTTTCTGACTCGATGAAAGCATCGCCAAAGAAAAAAACAAATGGAACATCCATGAAGATGCTCATAGACCAAGAAATGTCCAAAGAAATTGTTTCCAACCACAATCCACCAAATGTAGTTGCTAAATTAATGGGCCTTGATACCCTCCCACTGGCAGACCCTAATTTAGCCGTCGAGAGAAGCCATCGAGAATGTTATTCCCAACCTATGTATGGTCATTCAGGGACACCATTCAGACATTGGCAGCTAGAAGATAGGTTTATGGACAAGGAAATGCTTCATGAAATTCATCCTCGCACACGACAGATTGCTTACGAAGACATCTATGATGTATGTCAGCAATCTCAGAGAACAAGCAGCGTAAGAGTCAAGACACCAGAGAGAGAAAAGTGGACTGTAGATGCCAATGCAAAAAAAATGCCTCTCATTTACCAGAAATTCATGGAAGCAAAACGTCTGTCTACAGATGAGAGACTGCGTCAGTCCAACAAGTTGGATGAGGCATTGGAAGTTTTAAGCTCCAATAATGATCTGTTAATCAGGTTATTGGATTCTCCGAATCTTTATGAATTTCAGTCTACTCCACCAGTTGAAACAAAGCGTATCACTGTTCTTAAACCTTCGAAGGTGGTTGACAATGAAAAACCCGGTGGAAAGGGGAAAAAGAATGACAAGCAGATTAAGAAATCGGCAAATGTTTGTCAAGCAGCTGCATGGGAGAAAAATGGCACTGGATACTCTCCTGCATGTCAGAAAGTTGATGAGTTTCCAGTTCAACCTACTAGAATATTTGTATTGAAGCCTAGCTCTGCGAAGACACAAGATATCGAGGATGTGGCTTCTCCAACAATGTCATCACCTCGGAATATGCAATGTGGAAATTTCTATCAGGGAGCTGAAGACAATGATGCACTAGAACCAAGAGAAGCCGCAAAAGAAATTAGACAGCAAAGGCATGAAAGCCTGAGGAGGCATCAAATAGATGAAACTTTTTATTCTTCAGTATTTTCCAATGGTTATGCTGGTGATGAGAGTTCATTCGACAAATCAGATAATGAGTACACTGCTGGGAATTTAAGTGATTTGGAAGTCATGTCACCATCTCCAAGGCATTCTTGGGATTACATCGATCACTGTGGCAGCCTTTATTCTTCATCATCATTCAGTCGTGCATCCTGTTCTCCTGAGTCATCAGTATGCCGGGAGGCCAAAAAACGGCTTTCTGAAAGATGGGCCATTATGGCATCAAATAAGTGTTCTCAAGAACAAAGGCATTTGCGGAGAAGCTCTACCTTGGGTGAGATGCTTGCTCTATCGGATATAAAGAAATATGTAATATCCGAGGTTGGGGGTATTAGCAGGGAACAAGAACCAAGTGAATCAGTTTCTTGCAGTCGTAATCTCAATGAAGAAATATGCATGGATTGTTCTCCTATAAAATTTCCCAGGTCAAAATCTGTCCCTGTATCTTCCCCTCTATATGAAACCAGGCTCGATGGTGAAGTTTGTGATCATGATGCCAGCAAAGCACATGATTCCAAGGAACGGACAAAGTCAAAGAGTATGAAATCATCATTTAAAGGGAAAGTTACGAGTTTCTTATTCTCAAGGAACAAGAAATCAACCAAGGAAAAGTCTCCTCTGTCTCAATCTAAAGATGAATCACATTCTAATGTCTCTGAAACCTCAGTATCTCCAGTAAATTCACTTGGAGTCCTTGGGGATGGTATGCCTCAAAGCTTCAACAGTGGTGCCCATGGAGAGCATTCTCTTCCAGATCTACATGAATCATTGGGCAAAACGTTATCAGATTCTGTCTCTAAAGGAAAAGGCATGATATCTCCTGAGCCGGTCATTAGTGCCCTCGAAGTCATCTCCCAGTCTGAAAAACAGTATGGGTGTAGATCGCTTCTTCCAAACCAAACGCATCCCGGGTTGACTGTGTCAAAGACTACGATACCAGGGATTTCAAGCGAAAACCAAGATCATCCAAGTCCAATCTCAGTTTTAGAACCTCCATTTGAAGATGACAATGCAGCTCATGAGTCCTTGAACTGTATTCAGGGTGGTCAGCTGGGATCGCGGGTGTCTCTGAAGTCTAATTTAGTTGACAAGTCACCAACAATAGAATCAATAGCTAGGACCCTATCATGGGATGATTCTTGTATAGAGGTATCAAGTCCATATCCACTAAAGCCCTCCTTGGTTTCCCTAGACACCAAGGTAGAGGAACAAGACTTGCTTGTCTTGGTTGAGAAACTACTATCAGCAGCTGGACTTGATGATCAAGTGCAGTCTGATTCATTTTACTCAAGATGGCATTCCCTTGAAAGTGCATTGGATCCATCATTGAGGGGCACATATGCCAATATGAATGACAAGGAGCCTCAGCCTCTACATGAAGCCAAGAGAAGGCAGAGAAGATCAAATCAGAAGCTTGTATTTGACTGTGTCAATGTTGCACTAATGGAAATTACTGGTTATGGATCAGACAAGCTCTTACTGGGTAGGTTGTGGGGTGGGTGCCACAGTAGGGTCCCTGTCCCAGAGGGTGAAATTCCTCTATTGGTGGACCACATTTTAGCCCAAATGAAGGGGTTAATATCTGGTGGATTGAGGTCTGTTTGGGAGTATTGTAGGGACAGCAACAGCCTGGTGCTGGAGAGTTTTGTCAGAAAAGAGGTTGTGGAGAAAGGGTGGGTTGAACTTATGGGATTGGAAATTGATATTTTAGTGAAGAAAGTAGAAGGGAAGTTGCTACAAGAACTTGTGGAGGATGTTGTGGTTGATTTCACAGGCAGGGCCTGA 2874 0.4228 MMSCGMFCFFYKKNMFLWTLQIVSDSMKASPKKKTNGTSMKMLIDQEMSKEIVSNHNPPNVVAKLMGLDTLPLADPNLAVERSHRECYSQPMYGHSGTPFRHWQLEDRFMDKEMLHEIHPRTRQIAYEDIYDVCQQSQRTSSVRVKTPEREKWTVDANAKKMPLIYQKFMEAKRLSTDERLRQSNKLDEALEVLSSNNDLLIRLLDSPNLYEFQSTPPVETKRITVLKPSKVVDNEKPGGKGKKNDKQIKKSANVCQAAAWEKNGTGYSPACQKVDEFPVQPTRIFVLKPSSAKTQDIEDVASPTMSSPRNMQCGNFYQGAEDNDALEPREAAKEIRQQRHESLRRHQIDETFYSSVFSNGYAGDESSFDKSDNEYTAGNLSDLEVMSPSPRHSWDYIDHCGSLYSSSSFSRASCSPESSVCREAKKRLSERWAIMASNKCSQEQRHLRRSSTLGEMLALSDIKKYVISEVGGISREQEPSESVSCSRNLNEEICMDCSPIKFPRSKSVPVSSPLYETRLDGEVCDHDASKAHDSKERTKSKSMKSSFKGKVTSFLFSRNKKSTKEKSPLSQSKDESHSNVSETSVSPVNSLGVLGDGMPQSFNSGAHGEHSLPDLHESLGKTLSDSVSKGKGMISPEPVISALEVISQSEKQYGCRSLLPNQTHPGLTVSKTTIPGISSENQDHPSPISVLEPPFEDDNAAHESLNCIQGGQLGSRVSLKSNLVDKSPTIESIARTLSWDDSCIEVSSPYPLKPSLVSLDTKVEEQDLLVLVEKLLSAAGLDDQVQSDSFYSRWHSLESALDPSLRGTYANMNDKEPQPLHEAKRRQRRSNQKLVFDCVNVALMEITGYGSDKLLLGRLWGGCHSRVPVPEGEIPLLVDHILAQMKGLISGGLRSVWEYCRDSNSLVLESFVRKEVVEKGWVELMGLEIDILVKKVEGKLLQELVEDVVVDFTGRA 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0044 957 MobiDBLite consensus disorder prediction 527 547 - -
Lal20g0044 957 PANTHER DUF3741 FAMILY PROTEIN 665 956 - -
Lal20g0044 957 PANTHER DUF3741 FAMILY PROTEIN 40 641 - -
Lal20g0044 957 MobiDBLite consensus disorder prediction 561 631 - -
Lal20g0044 957 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 40 641 - -
Lal20g0044 957 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 665 956 - -
Lal20g0044 957 Pfam Protein of unknown function (DUF3741) 167 209 IPR022212 -
Lal20g0044 957 MobiDBLite consensus disorder prediction 527 544 - -
Lal20g0044 957 Pfam DUF761-associated sequence motif 58 72 IPR032795 -
Lal20g0044 957 Pfam Domain of unknown function (DUF4378) 773 948 IPR025486 -
Lal20g0044 957 MobiDBLite consensus disorder prediction 807 829 - -
Lal20g0044 957 MobiDBLite consensus disorder prediction 574 591 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0044 Lal-Chr20 314397 318956 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0044 22 954 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 40.524 3.27e-165 506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0044 20 314397 318956 Lal20g0044 20 314397 318956 ECH
Lal11g1106 11 14781444 14788206 Lal20g0044 20 314397 318956 LSH
Lal1g1867 1 20940379 20945752 Lal20g0044 20 314397 318956 LSH
Lal20g0044 20 314397 318956 Lal12g0878 12 7219001 7223231 PCT
Lal12g0878 12 7219001 7223231 Lal20g0044 20 314397 318956 PCT