Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0041 ATGGAGAAGAAAAGTGTACAGGTTATGGAAGCCCAAAACAAAGGCAAAGGCCTAATGGCACCACAAGACTTAACCACAAATTTAACCGCGCTTGTTGTAGATGATAATAAACTTACCCGAATGCTACATCAAAGGTTGCTGAATAAAGCTGGAGTGAAAAATCATGCAGTGGAAAATGGCAAAGAAGCCGTAGACATTCATTGCTCTGCTCAAAGTTTTGACATGATTCTCATGGACAAGGATATGCCTATCATGAATGGAATTGAGGCAACAAAGAAGCTTAGATCAATGGGTATTGGTAGCATGATTGTTGGTGTATCATCATCCTCTAAGGAAGAAGAAATAAGAGAGTTTATGGAAGCAGGGTTGAATGACTACAAAGTCAAACCCTTCACCTTCACCATGCTTAGTTCAATTATTGATAAGATCAATTCATCAAAATCCAACAACTCTTCGAATGGATGCAAGAACAACTAG 477 0.3878 MEKKSVQVMEAQNKGKGLMAPQDLTTNLTALVVDDNKLTRMLHQRLLNKAGVKNHAVENGKEAVDIHCSAQSFDMILMDKDMPIMNGIEATKKLRSMGIGSMIVGVSSSSKEEEIREFMEAGLNDYKVKPFTFTMLSSIIDKINSSKSNNSSNGCKNN 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0041 158 PANTHER TWO-COMPONENT RESPONSE REGULATOR 17 147 - -
Lal20g0041 158 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 17 147 - -
Lal20g0041 158 CDD REC_hyHK_CKI1_RcsC-like 31 140 - -
Lal20g0041 158 SMART REC_2 28 140 IPR001789 GO:0000160
Lal20g0041 158 Pfam Response regulator receiver domain 31 140 IPR001789 GO:0000160
Lal20g0041 158 Gene3D - 6 154 - -
Lal20g0041 158 SUPERFAMILY CheY-like 27 144 IPR011006 -
Lal20g0041 158 ProSiteProfiles Response regulatory domain profile. 29 144 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0041 Lal-Chr20 280039 280614 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0041 28 141 Response Regulator Gene Family AT3G04280 45.833 1.64e-28 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lal20g0041 Response_reg 4.8e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0041 - - gmx:100794931 154.066