Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0024 ATGGCTGCTGGGGAGCAAATCCAGGTGCTAAATGCACTTGATGTGGCAAAAACACAATGGTATCATTTCACTGCTATCATCATTGCCGGAATGGGTTTCTTCACTGATGCATATGATCTATTCTGCATATCTCTTGTTACAAAATTGCTTGGGCGCATATACTACCATGTTGAAGGTGCAGCAAAGCCTGGTACATTGCCACCAAATGTATCAGCTGCTGTAAATGGTGTAGCCTTCTGTGGAACACTTTCTGGTCAGCTTTTCTTTGGTTGGCTTGGTGACAAGTTGGGTCGAAAAAAAGTCTATGGCATGACCCTTATGATGATGGTTATATGCTCAATTGGTTCAGGCCTTTCTTTTGGACATACTCCAAAATCTGTCATGGCTACTCTTTGTTTTTTCAGATTCTGGCTTGGTTTTGGTATTGGTGGTGATTACCCTCTTTCTGCTACCATAATGTCTGAGTACTCCAATAAGAAGACTCGTGGCGCATTCATTGCTGCTGTCTTTGCTATGCAAGGTTTTGGAATTTTGGGAGGTGGTATATTTGCAATTATAGTCTCAGCTGCTTTTAAGGCCAGGTTTCATGCTCCATCTTACCAGGTTGATCCAATTGGTTCAACTGTTCCACAAGCAGATTACATTTGGAGGATAATTGTGATGGTTGGAGCACTCCCAGCTGCATTGACTTACTATTGGCGAATGAAGATGCCTGAAACCGCGCGTTACACTGCACTCGTTGCCAAGGATATGAAGCAGGCTGCAGCAGATATGTCTAAGGTTCTACAAGTCGAGATTCAAGCCGAACCAAAGATTGAGGATCAGAGAAATTCATTTGGCTTGCTCTCCAAGGAATTCCTACAGCGCCATGGACTACATTTAGTTGGCACTTCAGTCACATGGTTCTTGCTTGATATTGCATTCTACAGCCAGAATCTATTCCAAAAGGATATTTTCAGTGCAGTTGGTTGGATCCCTTCTGCGGAAACAATGAATGCTCTTGAGGAGGTTTATAAAATCGCGAGGGCGCAAACGATTATCGCTCTTTGCAGTACTGTTCCAGGTTACTGGTTCTCAGTTTTCTTGATTGACAGGATTGGAAGGTTTGCTATCCAATTGATGGGATTCTTCTTCATGACGGTTTTCATGTTTGCTCTCGCCATTCCCTATGATCACTGGACTAAAAAGGAGAACCGAATTGGCTTTGTGGTGCTTTATTCTTTTACCTTCTTCTTTTCAAATTTTGGGCCTAATGCTACAACATTTGTGGTGCCAGCTGAGATTTTCCCTGCTAGATTCCGATCCACTTGCCATGGAATATCATCAGCTTTTGGTAAGCTTGGGGCCATAGTTGGTGCATTTGGATTCTTGTATTTGGCACAGAACAAGGATAAGAGTAAAGCAGATGCAGGGTACCCTGCAGGTATTGGTATGAAAAATTCACTGATTGTTTTAGCTGTAGTTAATGTTTTAGGCTTCCTTTTTACTTTCTTGGTGCCTGAGGCAAATGGAAAGTCTTTGGAGGAAATGTCAGGTGAGAATGAAGAGGAAGAAGTAACAAGGGACACATCACATAGCAATAACAGAACTGGTCCATATGTTTAG 1605 0.4249 MAAGEQIQVLNALDVAKTQWYHFTAIIIAGMGFFTDAYDLFCISLVTKLLGRIYYHVEGAAKPGTLPPNVSAAVNGVAFCGTLSGQLFFGWLGDKLGRKKVYGMTLMMMVICSIGSGLSFGHTPKSVMATLCFFRFWLGFGIGGDYPLSATIMSEYSNKKTRGAFIAAVFAMQGFGILGGGIFAIIVSAAFKARFHAPSYQVDPIGSTVPQADYIWRIIVMVGALPAALTYYWRMKMPETARYTALVAKDMKQAAADMSKVLQVEIQAEPKIEDQRNSFGLLSKEFLQRHGLHLVGTSVTWFLLDIAFYSQNLFQKDIFSAVGWIPSAETMNALEEVYKIARAQTIIALCSTVPGYWFSVFLIDRIGRFAIQLMGFFFMTVFMFALAIPYDHWTKKENRIGFVVLYSFTFFFSNFGPNATTFVVPAEIFPARFRSTCHGISSAFGKLGAIVGAFGFLYLAQNKDKSKADAGYPAGIGMKNSLIVLAVVNVLGFLFTFLVPEANGKSLEEMSGENEEEEVTRDTSHSNNRTGPYV 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0024 534 MobiDBLite consensus disorder prediction 508 534 - -
Lal20g0024 534 Gene3D MFS general substrate transporter like domains 21 528 IPR036259 -
Lal20g0024 534 CDD MFS_PhT 26 501 - -
Lal20g0024 534 ProSiteProfiles Major facilitator superfamily (MFS) profile. 25 504 IPR020846 GO:0022857
Lal20g0024 534 SUPERFAMILY MFS general substrate transporter 13 511 IPR036259 -
Lal20g0024 534 Pfam Sugar (and other) transporter 27 511 IPR005828 GO:0016021|GO:0022857|GO:0055085
Lal20g0024 534 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 5 520 - -
Lal20g0024 534 TIGRFAM 2A0109: phosphate:H+ symporter 12 513 IPR004738 GO:0005315|GO:0006817|GO:0016021
Lal20g0024 534 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-7-RELATED 5 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0024 Lal-Chr20 186343 187947 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0024 3 518 Inorganic Solute Cotransporters AT3G54700 83.752 0.0 913
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0024 K08176 - gmx:100819445 950.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0024 20 186343 187947 Lal20g0024 20 186343 187947 ECH
Lal1g1887 1 21143078 21144700 Lal20g0024 20 186343 187947 LSH
Lal13g1020 13 7527987 7529546 Lal20g0024 20 186343 187947 PCT
Lal24g0780 24 6064310 6065926 Lal20g0024 20 186343 187947 PCT