Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0018 ATGCCTCAGTTGCTTCTACAACTATTCACCCCTTTCTTCTTCTTCTTCTTCTTCTTCCTTCTTCCATTGTTCTTCTTCTTCTTCCTCACACTTCATAAAAATCATAAGAAAGTCGAAGCACTTTCTTCAACCACCTCAACTACACTTCCAAAAGCATACCCACTTATTGGTTCCTACTTAGCCTTCAAAGCCAACATCAACCGCCGTATCCAATGGCTATCCGACGCCGTCCTCGCCTCACCCAACGCCACCTTCACCTTCCACCAACTCCCTGGCCAAACATCTGTCATCACCGCCAACCCTGCCACCGTGCAACACATCCTCAAGACCCATTTCTCCAATTACCAAAAAGGTGCCAACTTTGTCACTACCCTCTCCGATTTCCTTGGCGCCGGAATCTTCAACGTCAACGGCGAGACATGGAAGTTCCAGCGCCAAGTCGCTAGCCACGAATTCAACACCAAGTCTCTCAGGAATTTCGTCGAACAAGTGGTGGACGCTGAACTCAACCACCGTTTAATCCCAATTCTCAATGAATCTCAATCCAAAACCCTAGATTTCCAAGACATTCTCCAACGATTCGCGTTTGATAATATCTGCAAAATTGCGTTTGGGTTCGACCCTGAATACCTCACTCCATCGCTAAAAGCTAGTAATTTCGCGAAAGCTTTCGAAGAAGCTAACATGATCAGCTCAAAACGGTTTCGAGAACCGTTACCCATTGTATGGAAAATGAAGAGGAAACTGAACATTGGATCGGAAAAGCGTTTGAGAATAGCGGTGTCTGAAGTTCACGAATTCGCAAGGAAGATAGTGAGAGATAAGAAGAAGGAACTAGAAGAGAAGGCATCACTTGATTCTGCAGACATTCTTTCAAGGTTCTTGAGTTCAGGGCACTCTGATGAGGATTTCGTGATGGATATAGTGATAAGCTTCATTTTAGCAGGAAAGGACACCACATCAGCGGCATTAACATGGTTTTTTTGGTTATTGTCTAAAAATCCAAGAGTGGAAAAAGAGATAATTAAAGAGATTAGAGAAAAATCAGAAGGTGTAAGAGTGTATGATGAAGTGAAGGATATGGTTTACACGCATGCTGCATTGAGTGAAAGCATGAGGTTATACCCACCAGTTCCAATGGATAGTAAGGAGGCAGTGAATAATGATGTTTTGCCTGATGGGACAATTGTGAAGAAAGGTATGTCAGTAACATATCATGTTTACGCTATGGGGAGGATGGAATCTATTTGGGGTTCTGATTGGGCTCAGTTTCGACCTGAGAGGTGGTTGGAGAGAGTGGCTGAATCAAGCTCAGTTTCAGGGAAGTGGAGGTTTGTGGGAAAGGACTCTTTTACTTACCCTGTCTTTCAAGCAGGTCCTAGGATTTGTTTAGGGAAAGAAATGGCTTTCTTACAAATGAAGAGGGTCGTTTCTAGTGTTCTTAACAACTTTAGGGTGGTGCCACTAGTGTCTCACCCTGACTTCATTTCATATTTGACCTCTCAAATGAAAGGTGGCTTCCCGGTCAAGATCCAAAAAAGGGTTGATTCAATATAG 1557 0.4355 MPQLLLQLFTPFFFFFFFFLLPLFFFFFLTLHKNHKKVEALSSTTSTTLPKAYPLIGSYLAFKANINRRIQWLSDAVLASPNATFTFHQLPGQTSVITANPATVQHILKTHFSNYQKGANFVTTLSDFLGAGIFNVNGETWKFQRQVASHEFNTKSLRNFVEQVVDAELNHRLIPILNESQSKTLDFQDILQRFAFDNICKIAFGFDPEYLTPSLKASNFAKAFEEANMISSKRFREPLPIVWKMKRKLNIGSEKRLRIAVSEVHEFARKIVRDKKKELEEKASLDSADILSRFLSSGHSDEDFVMDIVISFILAGKDTTSAALTWFFWLLSKNPRVEKEIIKEIREKSEGVRVYDEVKDMVYTHAALSESMRLYPPVPMDSKEAVNNDVLPDGTIVKKGMSVTYHVYAMGRMESIWGSDWAQFRPERWLERVAESSSVSGKWRFVGKDSFTYPVFQAGPRICLGKEMAFLQMKRVVSSVLNNFRVVPLVSHPDFISYLTSQMKGGFPVKIQKRVDSI 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0018 518 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal20g0018 518 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal20g0018 518 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal20g0018 518 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal20g0018 518 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal20g0018 518 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal20g0018 518 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal20g0018 518 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal20g0018 518 PRINTS P450 superfamily signature 463 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal20g0018 518 PANTHER CYTOCHROME P450 94A2-LIKE 15 513 - -
Lal20g0018 518 Pfam Cytochrome P450 50 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal20g0018 518 PANTHER CYTOCHROME P450 15 513 - -
Lal20g0018 518 Gene3D Cytochrome P450 40 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal20g0018 518 SUPERFAMILY Cytochrome P450 50 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0018 Lal-Chr20 156091 160638 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0018 42 514 Cytochrome P450 AT5G63450 49.895 6.63e-160 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0018 K20769 K13407 gmx:100818732 710.679